Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac8g03226 ATGGCTGCAGACCCTCAGAAAATTCACCCTGTCTATGATGTTGAGGCACCAAACCAGCCTTCAGCACCCTTGGTGCCAAGAAGCATGTCTAAATCTGATGCAGGTGATCCAGAGAGAGGAGTGCAAGAACAACAACAACAACATCCTCCACAACACACCATTCCTGTGATGCATTCAAGGCCACCAAAGAAAAGAAGAAGCTGCTGCTGCAGGTTTTTCTGTTGGTTGATAAGCATATTGCTGATTCTGATTGTGGCCATTGCCATCACAGTTGGGATATTATACCTTGTGTTCAGACCAAAGGTTCCAAAGTACTCAGTGGATGAGCTCAGAGTCACACAGTTTGATACCTCTGACAACAACAGTTTATCTGCCACTTTCAACTTGACAATCACTGCCAGAAACCCTAACAAGAAGATTGGAATATACTATGAAGGTGGCAGCCACATAAGTGCTTGGTACGAGGACACAAAACTATGTGAAGGGTCTTTACCAAAGTTCTACCAAGGTCACCGCAACACCACAGTGCTTAGCATCCCTCTCACTGGACAAACACAAGATGCTACTGGCCTGCAAAGTAGCCTTCAGCAGCAGCTGCAGGAAACTGGAAATGTGCCCCTCAATTTGAAGGTGAACCAGCCTGTGAGGATCAAGCTTGGGAAGTTGAAACTGTTCACAATCAAGTTCAGGATTAGGTGCAACATTTTGGTGGACAACCTTACTGCTAATAGTTCTATTAGAATTCAGAGCAGTAGTTGTAAATTCAGGTTTAGGCTGTGA 780 0.4487 MAADPQKIHPVYDVEAPNQPSAPLVPRSMSKSDAGDPERGVQEQQQQHPPQHTIPVMHSRPPKKRRSCCCRFFCWLISILLILIVAIAITVGILYLVFRPKVPKYSVDELRVTQFDTSDNNSLSATFNLTITARNPNKKIGIYYEGGSHISAWYEDTKLCEGSLPKFYQGHRNTTVLSIPLTGQTQDATGLQSSLQQQLQETGNVPLNLKVNQPVRIKLGKLKLFTIKFRIRCNILVDNLTANSSIRIQSSSCKFRFRL* 260
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac8g03226 259 Pfam Late embryogenesis abundant protein 130 234 IPR004864 -
Phac8g03226 259 Gene3D - 96 240 - -
Phac8g03226 259 MobiDBLite consensus disorder prediction 39 53 - -
Phac8g03226 259 MobiDBLite consensus disorder prediction 1 62 - -
Phac8g03226 259 SUPERFAMILY LEA14-like 92 217 - -
Phac8g03226 259 PANTHER LATE EMBRYOGENESIS ABUNDANT (LEA) HYDROXYPROLINE-RICH GLYCOPROTEIN FAMILY 31 241 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac8g03226 Phac-Chr8 40614401 40615481 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac8g03226 49 250 EF-hand Containing Proteins AT5G21130 31.707 1.05e-33 121
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac8g03226 - - gmx:100782663 394.815
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phac8g03226 8 40614401 40615481 Phac8g03226 8 40614401 40615481 ECH
Phac6g01149 6 15274900 15276344 Phac8g03226 8 40614401 40615481 PCT