Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac6g01149 ATGATGGCAGAACACCAGAGAATTCATCCTGTTCATGATGTGGAGGCACCACACAGACCTTTGGTGCCTGAAAACAGTTATAAATCTGATAGGGTTTTTCCTAAACGCACCTTTCCTGTGATGCATTCCAAGCCACCAAAGAGAAGAAGAAGCTGTTGCTGCAGGTTTTTGTGTTGGACACTTAGCATATTGCTGATTTTGATCGTTGCTATTGGCATCAGTGTAGGGATCATATACCTTGTGTTTAGGCCAAAGCTCCCCAAATACTCAGTGGACCAACTGAGGATAAGCCAGTTCAATGTTTCTGACAGCAACACCCTCTCAGCAACCTTCAATGTGGCGATCACTGCAACAAATCCAAACAAGAAGATTGGGATATACTATGAGGGTGGAAGCCACATAAGTGCTTTGTACATGGACACACAATTGTGTGAAGGGTCTTTGCCAAAGTTCTACCAGGGTCACAGGAACACCACAGTGCTTGATCTGTCTCTAACAGGTGAAGCACAAGATGCAAGTGCCCTAGTGAGTAGAATTCAGGAGCAGCTGCAACAGACCAACAATATTCCCCTTGATCTTAAGGTTAATCAACCTGTGAGGGTTAAGCTTGGTAAGTTGAAGCTCTTCAAAGTCAAGTTCAGGGTTAGGTGCAAGCTTGTGGTGGATAATCTTGGTGCTAATAATGATATTAGCATTTCAAGCAGTAATTGTAAGTTCAGGTTTAGGCTATGA 732 0.4344 MMAEHQRIHPVHDVEAPHRPLVPENSYKSDRVFPKRTFPVMHSKPPKRRRSCCCRFLCWTLSILLILIVAIGISVGIIYLVFRPKLPKYSVDQLRISQFNVSDSNTLSATFNVAITATNPNKKIGIYYEGGSHISALYMDTQLCEGSLPKFYQGHRNTTVLDLSLTGEAQDASALVSRIQEQLQQTNNIPLDLKVNQPVRVKLGKLKLFKVKFRVRCKLVVDNLGANNDISISSSNCKFRFRL* 244
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac6g01149 243 Pfam Late embryogenesis abundant protein 115 218 IPR004864 -
Phac6g01149 243 PANTHER LATE EMBRYOGENESIS ABUNDANT (LEA) HYDROXYPROLINE-RICH GLYCOPROTEIN FAMILY 17 224 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac6g01149 Phac-Chr6 15274900 15276344 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac6g01149 47 243 EF-hand Containing Proteins AT5G21130 29.949 6.16e-31 114
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac6g01149 - - gmx:100789322 407.912
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phac6g01149 6 15274900 15276344 Phac6g01149 6 15274900 15276344 ECH
Phac6g01149 6 15274900 15276344 Phac8g03226 8 40614401 40615481 PCT