Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac8g01887 ATGGGGTGTTTGGATGATGGGCGTTTCGCTGTTGTGATTGAAAATGGAGTGAACAATGACTGTGGTGAAGTGGGGTTGGGGAATGATGGTGGTGCCATTGAGGAGGCTGTGAAGGTTTTGTTGGAGGGTCTAGGGGAAGATGTAAACAGGGAAGGACTTAGAAAGACACCACTTCGTGTTGCCAAGGCCCTTAGTGAAGGAACCAGAGGTTACAGGCAAAAGGTGAAGGACATAGTTCAAGGTGCTTTATTCCCTGAAGCTGGTCTAGATAATAGAGTTGGTCATGCAGGTGGAGCAGGTGGACTTGTGATTGTTCGAGATCTTGACTTGTTTTCTTATTGTGAGTCTTGCTTGCTTCCATTCCAGGTCAAGTGTCATGTGGGTTATGTCCCCTCTGGTGAAAGAGTTGTTGGTTTGAGCAAGCTCTCTCGTGTTGCTGATGTATTTGCAAAACGGCTTCAAGAGCCTCAACGTCTGGCAGATGAGATGTGTTCTGCTTTGCATCAGGGAATAAAGCCAGCAGGTGTCGCTATCGTACTTCAGTGTACACACATACACTTTCCAGACATAGAATCGGTCTTTCTCGACTCAAACCACAAAGGATGGGTTAAGATACTTGTTTCCTCAGGTTCTGGGGATTTTGAGAACAAAAATGCAGATATATGGAATGATTTCTTTAGTCTTCTTAAATTTAGAGGCATCAGTGTGGATAAAATTCACTTCAGAGGATCATCTGATCCATGCTGGTGTCCTTCTCAGTCTTTTCTATCTGCCAAAGTTTCCTCGAAAATCGGACCAGTCAATCCTGTAATGATCTCTGCAGTAGCTTCGATCATTGAATCTTTGGGAGAAGATCCTTTGAGGAACGAGCTTATAGGGACCCCAAGTAGATTTGTGAAATGGTTGATGAACTTTCAAAACAGTAAGTTTGATGTGAAGTTGAATGGTTTTCTTTATGGTGGGATAGATGCTTTGAATGTAAATGAAGAGATTAATTTAAACAAAAAAATAACGTCTGAGCTGAACATACCTTTTTGGTCACAATGTGAGCATCATTTACTTCCATTTCATGGTGTTGTTCACATAGGATACCTCATATCTGATGGATTCAATCCTATAGGAAAATCACTTCTACAATCAATAGTACATTTTTATGGTTTCAAGCTCCAAGTTCAGGAAAGGCTTACCAGGCAGATAGCTGAAACCATTTCCCCACTGTTAGGGGGAGATGTGATAGTAGTTGTAGAGGCAAGTCACACATGTATGATCTCTAGGGGAATTGAGAAGTTTGGAAGTAGTACGGCTACGATTGCTGTGTTAGGACGATTTTCAACCGACCCTACTGCTAGAGCTTCATTCTTGCAGAGTATTCCAAGTCCTACATCAACTGGGGAGCAATGA 1401 0.424 MGCLDDGRFAVVIENGVNNDCGEVGLGNDGGAIEEAVKVLLEGLGEDVNREGLRKTPLRVAKALSEGTRGYRQKVKDIVQGALFPEAGLDNRVGHAGGAGGLVIVRDLDLFSYCESCLLPFQVKCHVGYVPSGERVVGLSKLSRVADVFAKRLQEPQRLADEMCSALHQGIKPAGVAIVLQCTHIHFPDIESVFLDSNHKGWVKILVSSGSGDFENKNADIWNDFFSLLKFRGISVDKIHFRGSSDPCWCPSQSFLSAKVSSKIGPVNPVMISAVASIIESLGEDPLRNELIGTPSRFVKWLMNFQNSKFDVKLNGFLYGGIDALNVNEEINLNKKITSELNIPFWSQCEHHLLPFHGVVHIGYLISDGFNPIGKSLLQSIVHFYGFKLQVQERLTRQIAETISPLLGGDVIVVVEASHTCMISRGIEKFGSSTATIAVLGRFSTDPTARASFLQSIPSPTSTGEQ* 467
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac8g01887 466 Gene3D - 96 232 IPR043133 -
Phac8g01887 466 Gene3D - 29 79 IPR043134 -
Phac8g01887 466 FunFam GTP cyclohydrolase 1 328 459 - -
Phac8g01887 466 SUPERFAMILY Tetrahydrobiopterin biosynthesis enzymes-like 269 458 - -
Phac8g01887 466 PANTHER GTP CYCLOHYDROLASE I 32 185 IPR001474 GO:0003934|GO:0046654
Phac8g01887 466 Pfam GTP cyclohydrolase I 33 185 IPR020602 -
Phac8g01887 466 Pfam GTP cyclohydrolase I 273 457 IPR020602 -
Phac8g01887 466 Gene3D - 327 459 IPR043133 -
Phac8g01887 466 Gene3D - 267 309 IPR043134 -
Phac8g01887 466 SUPERFAMILY Tetrahydrobiopterin biosynthesis enzymes-like 18 230 - -
Phac8g01887 466 FunFam GTP cyclohydrolase 1 97 232 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac8g01887 Phac-Chr8 18088891 18093333 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac8g01887 K01495 - gmx:100783814 848.58
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phac8g01887 8 18088891 18093333 Phac10g00200 10 3435334 3437629 PCT