Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac10g00200 ATGGGGCATTTGGGTGAGAATGGTTTGAATTGCGAGCATGGAAATGGAGTGAGCATGTGTGGTGATGAAGAGAGCTTTGAGAAAGAGAGCAATTCAAGTTCCATTCAATATGCTGTCAAAGTCTTGTTGATGGGTTTAGGAGAAGATATCAACAGAGAAGGCATTAGAAAGACACCACTTCGTGTTGCCAAAGCCCTTTCTGAAGGAACCAGAGGTTATACTCAAAGTGTTAAGGAAATTGTGGAAGATGCATTATTCCCTGAAGCTTGTGTAGGCAATAGTGAAGTTGGTGATGCAGGTGGTGGAATAGATGGACTTGTGATTGTGAGAAACCTTGACTTTTACTCCTATTGTGAGTCTTGCATGCTACCATTCTATTTCAAGTGTCATGTGGGTTATGTGCCTTCTGGCCAAAGGGTTTTAGGGTTAAGCAAGCTCTCTCGTGTCACCAATGTCTTTGCAAAGCAACTCCAAGAGCCTCAGCGTCTTGCAGATCAGGTCTGTTCTGCATTGCAGGAAGGAATCCAACCCACAGGTGTTGCTGTTGTGCTTCAATGCAAACACCTTCCCTTTCCAGACATGGAATCAAACTCTCTTCACTCACACCACAAAGGGGTGCAGGGGATACTCGTTTCTGCAGGCTCTGGAGCTTTTCAAAACAAAGATGCACTCATCTGGGATGACTTTCTTGGCCTCCTTAACTCTAGAGGTGTTGACAAGGATCAAATTCATGATAAAGTGTCATTGGACCAATGTTGGTGTCCTTCTTTGTCTTCTTCTGAAGTTTCACTCAAGAATGAAGAAATCAACCCTCTTATGGTCACTGCAGTGGCTTCAATTCTTAAGTCTTTAGGTGAGGATCCAACTAGGAAGGAGTTACAAGGGACTCCTGGTAGGTACACAAAATGGCTGATGAACTTCCAATGCAGTAGCATTGAAAAGAAGCTGAAGGGTTTGGTTTGGAGTGGGACAAATGGTGCTTCTAATGACAACAACAAACTACACTCAGAGCTGAACTTGCCTTTCCTGTCACAATGTGAGCATCACTTGCTTCCATTTCATGGTGTTGTTCACATAGGATACTTCATTTCCCCAGGGTTTGAGATTCAGAAATCCCTTTTGCAGACAATAGTGCATTTCTTTGGGGTTAAGCTCCAGGTTCAAGAAAGGCTCACCAAGCAGATTGCAGAAACGGTTTCTTCATTGATTGGTGGGGATGTGGTGGTGGTGGTGGAAGCAAGTCACACATGTATGATGTCTCGGGGAATTGAGAAGTTTGGTAGTAATACTGCTACCATTGCTGCATTGGGAAGTTTTTCAACTGATCTTGCTGCAAGAGCTATGTTCCTGAAGAGTATTCCAAGTGCTGTATCTCTTTAA 1380 0.4362 MGHLGENGLNCEHGNGVSMCGDEESFEKESNSSSIQYAVKVLLMGLGEDINREGIRKTPLRVAKALSEGTRGYTQSVKEIVEDALFPEACVGNSEVGDAGGGIDGLVIVRNLDFYSYCESCMLPFYFKCHVGYVPSGQRVLGLSKLSRVTNVFAKQLQEPQRLADQVCSALQEGIQPTGVAVVLQCKHLPFPDMESNSLHSHHKGVQGILVSAGSGAFQNKDALIWDDFLGLLNSRGVDKDQIHDKVSLDQCWCPSLSSSEVSLKNEEINPLMVTAVASILKSLGEDPTRKELQGTPGRYTKWLMNFQCSSIEKKLKGLVWSGTNGASNDNNKLHSELNLPFLSQCEHHLLPFHGVVHIGYFISPGFEIQKSLLQTIVHFFGVKLQVQERLTKQIAETVSSLIGGDVVVVVEASHTCMMSRGIEKFGSNTATIAALGSFSTDLAARAMFLKSIPSAVSL* 460
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac10g00200 459 PANTHER GTP CYCLOHYDROLASE I 25 189 IPR001474 GO:0003934|GO:0046654
Phac10g00200 459 Gene3D - 325 455 IPR043133 -
Phac10g00200 459 SUPERFAMILY Tetrahydrobiopterin biosynthesis enzymes-like 261 454 - -
Phac10g00200 459 FunFam GTP cyclohydrolase 1 101 236 - -
Phac10g00200 459 Pfam GTP cyclohydrolase I 275 453 IPR020602 -
Phac10g00200 459 Pfam GTP cyclohydrolase I 36 189 IPR020602 -
Phac10g00200 459 Gene3D - 22 80 IPR043134 -
Phac10g00200 459 Gene3D - 261 314 IPR043134 -
Phac10g00200 459 Gene3D - 101 236 IPR043133 -
Phac10g00200 459 SUPERFAMILY Tetrahydrobiopterin biosynthesis enzymes-like 19 232 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac10g00200 Phac-Chr10 3435334 3437629 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac10g00200 K01495 - gmx:100792313 637.491
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phac8g01887 8 18088891 18093333 Phac10g00200 10 3435334 3437629 PCT