Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac8g01001 ATGGCAGCAGCAACCATAAGGTATGCAGTTGTCACAGGAGCAAACAAAGGGATAGGATTTGGGGTTTGCAAGCAATTGATTTCTAATGGTATCACTGTGGTGCTAACAGCAAGGGATGAGAAAAGGGGTATTGAAGCTGTTGAAAAACTGAAAGAGTTTGGTGTGTCTGACCAAGTGGTGTTTCATCAGCTTGATGTGACTGACCCTAAAAGCATTGAATCCCTTGCAAATTTCATCAAAACCCAGTTTGGGAAACTTGATATCTTGGTGAATAATGCAGGAGTCAGTGGAACTAGTGTTGACCATGATGCTATAGCTGCTGCAGGGGAAAAACTTGGCAGTGTTGATTGGAGAAAATTCGCACATGAAACTTATGAATCTGCAGAATCGAGCATTAGAACAAATTACTATGGAGCCAAATTAATGTGTGAAGCATTTATTCCCCTTCTAGAATTGTCAGACTCACCAAGGATTGTTAATGTTTCCTCCACCATGGGGAAGTTGGAGAAAATACCAAATGAATCGGCTAGAGGAGTCCTAAGTGATGTTGAAAGCTTAACAGAAGAAAAGGTGGAAGAAGTTTTGAATCAGTTTCTAAATGGTTTTAAAGAGGGTTCATTACAAACCAATGGGTGGCCACATGTGCTTTCTGCATATATAGTCTCAAAAGCTGCTTTGACTGCCTACACAAGAGTCCTTACCAAGAAGTACCCATCTTTCTGCATCAATGCTGTTTGCCCTGGCTTTGTGAAAACAGATTTAAACTTCAATATTGGCTATTTTAGTATTGAAGAAGGTGCTGAAAGTGTTGTAAGGTTGGCTCTGCTACCTAATGGAGGTCCTTCTGGTCTCTTCTTTTCTCGAAGTGAAGTGACATCAGTCTGA 885 0.4079 MAAATIRYAVVTGANKGIGFGVCKQLISNGITVVLTARDEKRGIEAVEKLKEFGVSDQVVFHQLDVTDPKSIESLANFIKTQFGKLDILVNNAGVSGTSVDHDAIAAAGEKLGSVDWRKFAHETYESAESSIRTNYYGAKLMCEAFIPLLELSDSPRIVNVSSTMGKLEKIPNESARGVLSDVESLTEEKVEEVLNQFLNGFKEGSLQTNGWPHVLSAYIVSKAALTAYTRVLTKKYPSFCINAVCPGFVKTDLNFNIGYFSIEEGAESVVRLALLPNGGPSGLFFSRSEVTSV* 295
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac8g01001 294 PANTHER (+)-NEOMENTHOL DEHYDROGENASE 7 291 - -
Phac8g01001 294 Gene3D - 4 294 - -
Phac8g01001 294 PRINTS Glucose/ribitol dehydrogenase family signature 150 166 IPR002347 -
Phac8g01001 294 PRINTS Glucose/ribitol dehydrogenase family signature 238 255 IPR002347 -
Phac8g01001 294 PRINTS Glucose/ribitol dehydrogenase family signature 8 25 IPR002347 -
Phac8g01001 294 PRINTS Glucose/ribitol dehydrogenase family signature 219 238 IPR002347 -
Phac8g01001 294 PRINTS Glucose/ribitol dehydrogenase family signature 84 95 IPR002347 -
Phac8g01001 294 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 156 164 IPR002347 -
Phac8g01001 294 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 219 238 IPR002347 -
Phac8g01001 294 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 84 95 IPR002347 -
Phac8g01001 294 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 7 279 IPR036291 -
Phac8g01001 294 CDD carb_red_PTCR-like_SDR_c 7 291 IPR045313 GO:0016616
Phac8g01001 294 FunFam (+)-neomenthol dehydrogenase 2 294 - -
Phac8g01001 294 Pfam short chain dehydrogenase 8 168 IPR002347 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac8g01001 Phac-Chr8 6742165 6745336 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac8g01001 7 166 Acyl Lipid Metabolism Gene Families AT1G63380 30.357 2.07e-09 55.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac8g01001 K15095 - gmx:106797124 496.508
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phac8g01001 8 6742165 6745336 Phac8g01001 8 6742165 6745336 ECH
Phac10g01168 10 33169178 33171663 Phac8g01001 8 6742165 6745336 PCT