Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac10g01168 ATGGGAGAAGCAGCAAAAAGGTATGCAGTAGTGACAGGAGCTAACAAGGGGATAGGCTATGGAATATGCAAGAAACTTGCTTTGAATGGAGTTGTGGTGGTGCTAACAGCTAGAAATGAGAAAAGGGGTTTGGAAGCAGTTGAAAGATTGAAAGAGTTTGGCCTCTCAGACTTTGTGGTTTTTCATCAACTTGATGTCACAGACCCTTCCAGTGTTACTTCCTTAGCAGATTTCATCAAAACCAGATTTGGAAAACTTGATATATTGGTGAACAACGCAGGTGTTCCTGGAGGAATAGTAAATGGAGAGAATTATCTTAGAAGGAAAAAGGGTGAAATATCGGATTGGAATCTAATAGTGTATCAAAATTATGAGTTAGCCAAAGAATGTGTTGAAACAGACTTCTTTGGTGTAGAGAGAGTAACTGAAGCTCTTCTTCCTCTGCTCCAACTCTCCACTTCACCAAGGATTGTCAATATTTCTGGTCAAATAGGACTATTGAAGCACATACCAAATGAGTGGGCAAGAGGAGTTTTTGGTGACATTGAGAATCTCACAAATGAGAAACTTTATGAGGTACTTAGAGAGTTTCTGAAAGATTACAAAGAAGGATCATTAGAATCCAAGAATTGGCCACCTGTGGTTTCTGGTGTCACCATGGCAAAAGCAGGTATAAATGCCTACACAAGGATGCTAGCTAAGAAGTTCCCTCATTTTTGCATAAATTGTATATGCCCTGGCTCTGTCAAAACTGATATAAACCACAACCAAGGTTTGTTAAGTATTGATGAAGGTGCTGAAAATCCAGTTAGGCTAGCATTGTTGCCTGATCATGGTCCTTCTGGTCTCTTTTTCTCAATAGATCAAGTGATTCCCTTTTGA 882 0.3957 MGEAAKRYAVVTGANKGIGYGICKKLALNGVVVVLTARNEKRGLEAVERLKEFGLSDFVVFHQLDVTDPSSVTSLADFIKTRFGKLDILVNNAGVPGGIVNGENYLRRKKGEISDWNLIVYQNYELAKECVETDFFGVERVTEALLPLLQLSTSPRIVNISGQIGLLKHIPNEWARGVFGDIENLTNEKLYEVLREFLKDYKEGSLESKNWPPVVSGVTMAKAGINAYTRMLAKKFPHFCINCICPGSVKTDINHNQGLLSIDEGAENPVRLALLPDHGPSGLFFSIDQVIPF* 294
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac10g01168 293 FunFam (+)-neomenthol dehydrogenase 2 293 - -
Phac10g01168 293 Pfam short chain dehydrogenase 8 167 IPR002347 -
Phac10g01168 293 Gene3D - 3 293 - -
Phac10g01168 293 PANTHER (+)-NEOMENTHOL DEHYDROGENASE 7 289 - -
Phac10g01168 293 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 218 237 IPR002347 -
Phac10g01168 293 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 84 95 IPR002347 -
Phac10g01168 293 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 155 163 IPR002347 -
Phac10g01168 293 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 7 279 IPR036291 -
Phac10g01168 293 CDD carb_red_PTCR-like_SDR_c 7 293 IPR045313 GO:0016616
Phac10g01168 293 PRINTS Glucose/ribitol dehydrogenase family signature 218 237 IPR002347 -
Phac10g01168 293 PRINTS Glucose/ribitol dehydrogenase family signature 149 165 IPR002347 -
Phac10g01168 293 PRINTS Glucose/ribitol dehydrogenase family signature 237 254 IPR002347 -
Phac10g01168 293 PRINTS Glucose/ribitol dehydrogenase family signature 8 25 IPR002347 -
Phac10g01168 293 PRINTS Glucose/ribitol dehydrogenase family signature 84 95 IPR002347 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac10g01168 Phac-Chr10 33169178 33171663 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac10g01168 10 170 Acyl Lipid Metabolism Gene Families AT1G24360 29.012 4.17e-10 57.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac10g01168 K15095 - gmx:100802560 495.352
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phac10g01168 10 33169178 33171663 Phac10g01168 10 33169178 33171663 ECH
Phac10g01168 10 33169178 33171663 Phac8g01001 8 6742165 6745336 PCT