Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac7g03078 ATGTCCCACACACCACCGCAAACCCTCGATTCCGAGGAGGCATCCCCCGCCACCGCCGCCCAAACCCCCGACTCCCAAGCCGCCACGCTCCTCCACATCTCCTTCAACCAGGATTCCGGATGCTTCGCCGCGGCTACCGACCGTGGCTTCCGCATCTACAACTGCGACCCCTTCCGGGAGATCTTCCGCCGCGATTTCGGCCCTGGCGGCGGCGTTGGCCTTGTCCACATGCTCTTCCGCTGCAACATACTCGCCTTCGTCGGCGGCGGCGCTGACCCCCGGTACCCCCCCAACAAGGTTATGATTTGGGACGACCACCAGTCCCGCTGCATCGGTGAGCTCTCCTTCCGCTCCGAGGTGAAAGGCGTGCGTCTCCGGCGCGACCGCATCGTGGTGGTTCTGGCGCACAAGATCTTTGTGTACAACTTCTCCGATCTCAAGGTGCTGCACCAAATCGAGACCATCGCCAACCCTAAGGGCCTCTGCGACCTCTCCCACGTTTCCGCCACCATGGTCCTCGTCTGCCCCGGCTTGCAGAAGGGGCAGGTCAGGGTTGAGCACTACGCCTCCAAGAGGACCAAGTTCATCATGGCGCACGATTCCCGAATTGCGTGTTTTGCTCTCACGCATGATGGCAGGTTGCTCGCCACCGCCAGCTCCAAGGGCACCCTCATCAGGCTCTTCAATACCCTCGATGGTTCACTGCTTCAAGAGGTAAGGAGGGGTGCAGACCGAGCAGAGATATACAGCCTTGCATTCTCTCCTACTGCACAGTGGCTGGCTGTCTCAAGTGACAAGGGGACCGTTCATGTTTTCAACCTGAAGGTTGATTCTGGACTGATGGGGCATGACAGATCGCACAGTACTTCTTCTGAGGCTAATCCTGCTAGCCCTACTGCTGTTTCATCTCTTTCATTTATTAAAGGTGTGCTACCTAAGTATTTTAGCTCGGAGTGGTCTGTGGCTCAATTTCGCTTGCAAGAAGGTTTGCAGTATATTGTTGCATTTGGCCATCAAAAGAATACAATTGTAATACTAGGCATGGATGGCAGGTATGTCAGTAGTGCATCATATTGTCTCTCAAGTTTGTCATGCTCTGCCCTTTTGTGTTTTGTTTTTGGAAATGGGGGAGGGTGTTTGTTGTTTAAGAGATATTAG 1158 0.5509 MSHTPPQTLDSEEASPATAAQTPDSQAATLLHISFNQDSGCFAAATDRGFRIYNCDPFREIFRRDFGPGGGVGLVHMLFRCNILAFVGGGADPRYPPNKVMIWDDHQSRCIGELSFRSEVKGVRLRRDRIVVVLAHKIFVYNFSDLKVLHQIETIANPKGLCDLSHVSATMVLVCPGLQKGQVRVEHYASKRTKFIMAHDSRIACFALTHDGRLLATASSKGTLIRLFNTLDGSLLQEVRRGADRAEIYSLAFSPTAQWLAVSSDKGTVHVFNLKVDSGLMGHDRSHSTSSEANPASPTAVSSLSFIKGVLPKYFSSEWSVAQFRLQEGLQYIVAFGHQKNTIVILGMDGRYVSSASYCLSSLSCSALLCFVFGNGGGCLLFKRY* 386
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac7g03078 385 Pfam WD domain, G-beta repeat 242 273 IPR001680 GO:0005515
Phac7g03078 385 FunFam Autophagy-related protein 18a isoform A 28 357 - -
Phac7g03078 385 MobiDBLite consensus disorder prediction 1 23 - -
Phac7g03078 385 SUPERFAMILY WD40 repeat-like 29 275 IPR036322 GO:0005515
Phac7g03078 385 Gene3D - 26 351 IPR015943 GO:0005515
Phac7g03078 385 SMART WD40_4 189 229 IPR001680 GO:0005515
Phac7g03078 385 SMART WD40_4 16 54 IPR001680 GO:0005515
Phac7g03078 385 SMART WD40_4 232 273 IPR001680 GO:0005515
Phac7g03078 385 PANTHER WD-REPEAT PROTEIN INTERACTING WITH PHOSPHOINOSIDES WIPI -RELATED 24 354 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac7g03078 Phac-Chr7 34045888 34049007 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac7g03078 K22991 - gmx:100787427 640.573
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phac7g03078 7 34045888 34049007 Phac7g03078 7 34045888 34049007 ECH
Phac1g02984 1 38296354 38299315 Phac7g03078 7 34045888 34049007 ECH