Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac1g02984 ATGGCTACGCTTTCTGCATGCGCTTCTCCTCCATGGCCAGACCCTAATCCCACCACCTCCCCCAATTCAGACCCAAACCCTAATTTCCTCCCCGACCAGTCCCAAACACTCGACTTCGACTCCCTCATGCCTCCGCAACCGAAATCGCCACCGCAATACCGTTCCCCTGCCGCATCGCCGCCGGGATTATCCCCGGAGACGCCCCCGTCGGTACTCCACGTTGCCTTCAACCAGGACCAGGCCTGCTTCTCCGCCGCCACCGACAACGGTTTCCGCATCTATAATTGCAACCCCTTCAGCGAACAATTCCGCCGCGAGTTCGACGGCGGCGGAATCGGCCACGTCGAGATGCTCTTCCGCTGCAACATCATCGCCCTTGTCGGCGGCGGACCCCATCCCAAGTACTCGCCCAACAAGGTCATGATCTGGGATGACCACGAGGGCTGCTGCATCGGTGACCTATCACCCCGAGCCGCCGTCCGCAGCGTTCGGCTGCGCCGCGATCGGATTATCGTTGCCATCGAGCAGAAGATTTTGGTCTACAACTTCCAGGACCTCAGTCTCTTGCACCAGATTGAGACCTATCCCAACCCTAAGGGTCTCTGCGCGGTTTCGCAATTGTCGGATTCGCTCGTTCTCGCGTGCCCTGGGTTGCAGAAGGGTCAGATTCGTGTTGAGCACTACGCGCAGAAGAAGACAAAGTTCATATCTGCTCATGATTCCAGAATTGCTTGTTTCGCTCTCACGCTTGATGGGCAGTTCATTGCTACCGCCAGCACCAAGGGCACGCTGATTCGAATTTTCGACACTGTTCAGGGCACGCTTCTTCAGGAAGTGAGAAGGGGTGCAAATGTTGCTGAGATCTATAGTTTGGCATTCTCTTCTACTGCTCGGTGGCTAGCAGTCTCAAGTGACAAGGGTACTGTCCATGTTTTCAGCCTTAAGGTTAATTCTAGCATCCCCGAGCAAGAAAAGCCTCAAAATTCATCCAATTCAGATGCTGCCATTACCCCATCTAACTCATCTCGCTCCTTCACTAAATTTAAAGGAGTGTTACCCAAGTATTTCAATTCTGAGTGGTCAGTTGCTCAGTTTCGCTTACAAGAGGGCTCTCATTACACAGTTGCCTTTGGTAACGAAAAGAATACAGTCATAATTCTTGGCATGGATGGAAGCTTCTATAGATGCCAATTTGATCCAGTACATGGAGGGGAGATGACTCAGCTGGAGTATCATAACTTTTTAAAGCCAGAACCAGAAACTGCCTTGTGA 1272 0.5259 MATLSACASPPWPDPNPTTSPNSDPNPNFLPDQSQTLDFDSLMPPQPKSPPQYRSPAASPPGLSPETPPSVLHVAFNQDQACFSAATDNGFRIYNCNPFSEQFRREFDGGGIGHVEMLFRCNIIALVGGGPHPKYSPNKVMIWDDHEGCCIGDLSPRAAVRSVRLRRDRIIVAIEQKILVYNFQDLSLLHQIETYPNPKGLCAVSQLSDSLVLACPGLQKGQIRVEHYAQKKTKFISAHDSRIACFALTLDGQFIATASTKGTLIRIFDTVQGTLLQEVRRGANVAEIYSLAFSSTARWLAVSSDKGTVHVFSLKVNSSIPEQEKPQNSSNSDAAITPSNSSRSFTKFKGVLPKYFNSEWSVAQFRLQEGSHYTVAFGNEKNTVIILGMDGSFYRCQFDPVHGGEMTQLEYHNFLKPEPETAL* 424
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac1g02984 423 MobiDBLite consensus disorder prediction 44 67 - -
Phac1g02984 423 MobiDBLite consensus disorder prediction 321 341 - -
Phac1g02984 423 SMART WD40_4 61 95 IPR001680 GO:0005515
Phac1g02984 423 SMART WD40_4 272 313 IPR001680 GO:0005515
Phac1g02984 423 SMART WD40_4 229 269 IPR001680 GO:0005515
Phac1g02984 423 Pfam WD domain, G-beta repeat 286 312 IPR001680 GO:0005515
Phac1g02984 423 MobiDBLite consensus disorder prediction 1 70 - -
Phac1g02984 423 SUPERFAMILY WD40 repeat-like 66 327 IPR036322 GO:0005515
Phac1g02984 423 Gene3D - 63 395 IPR015943 GO:0005515
Phac1g02984 423 PANTHER WD-REPEAT PROTEIN INTERACTING WITH PHOSPHOINOSIDES WIPI -RELATED 67 414 - -
Phac1g02984 423 MobiDBLite consensus disorder prediction 10 24 - -
Phac1g02984 423 MobiDBLite consensus disorder prediction 25 42 - -
Phac1g02984 423 FunFam Autophagy-related protein 18a isoform A 69 400 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac1g02984 Phac-Chr1 38296354 38299315 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac1g02984 K22991 - gmx:100781692 723.005
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phac1g02984 1 38296354 38299315 Phac1g02984 1 38296354 38299315 ECH
Phac1g02984 1 38296354 38299315 Phac7g03078 7 34045888 34049007 ECH