Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac7g02578 ATGTCTACGCCATGCAATAATTCAGCCAGGTTTGTAAATTACAGGCCGATATCTGATGTCTCCAGTGATCTCACCATTGAAGTAGGAGCTTCAAGCTTTGCACTTCACAAGTTTCCTCTTGTTTCTAGGAGTGGAAGGATTCGGAAAATCCTGTTAGAAGCAAAAGATTCAAAAGTTTCACGGATAAGTCTCCCAAGCGTGCCAGGTGGTGCAGAGGCATTTGAGCTGGCTGCCAAATTCTGTTATGGAATCAATGTCGAGTTTACCCTCTCCAATGTTGCCATGCTAAAATGCGTAGCTCATTTTCTAGAAATGACAGAAGAGTTCTCAGAGAAAAACTTGGAGACACGAGCTGAAGCATATCTAAAGGAAACGGTGCTACCAAATATATCAAACACAATATCTGTTCTTCACCGTTGTGAAACTCTTATCCCCACTTCAGAAGAGATTAGTCTTGTCAGCAGACTAATCAATGCAATTGCAAATAATGCATGCAAAGAACAGCTCACCACTGGTTTACAAAAGCTGGATCACAACTTCCCTTCTAAAACCACCACAAACATGGAACCCGAAACACCTGCAGAATGGTGGGGAAAATCTCTCAATGTTCTTAGTCTTGATTTCTTCCAAAGAGTTTTGTCTGCTGTGAAGTCAAAGGGACTAAAACAAGACATGATCAGCAAAATTTTGATAAACTATGCACATAATTCTCTTCAAGGGATTGTTAGGGACCACCATGCAGTGAAAGGGTGTTTTCCCGACTTGGAATTGCAGAAGAAACAAAGAGTCATTGTTGAAGCCATTTCTGGCTTACTACCAACACAATCAAGGAAAAGCCCGGTTCCAATGGCATTTCTCTCAAGCTTGTTGAAAGCTGCAATAGCTGCATCAACATCCACTTCTTGCAGATCTGATCTGGAGAGAAGGATTGGTCTACAACTTGACCAGGCAATTCTCGAAGACATCCTAATCCCAACAAATTCACATCAAAATACCCATGGCACTATTTATGACACGGATTCAATTTTGAGAATTTTTTCCAATTTTCTGAACTTGGATGAGGAGGACGAAGAGGATAATAGTCACTTGAGAGATGAAAGTGAAATGGTTTATGACTTTGACAGCCCCGGATCCCCAAAACAAAGCTCAATTCTGAAGGTATCCAAACTGATGGACAACTATCTTGCTGAAGTAGCACTAGACCCAAACTTGTTGCCATCAAAGTTCATTTCCCTTGCTGAACTACTTCCAGATCATGCCCGTATTGTGAGTGATGGACTCTATAGAGCTGTTGATATCTTCCTTAAGGTTCATCCAAACATAAAGGATTCAGAGAGATACCGCCTGTGCAAAACCATTGATTGTCAGAAACTGTCTCAAGAAGCGTGCAGCCATGCAGCACAAAATGAAAGACTACCAGTGCAGATGGCAGTGCAGGTTCTATACTTTGAGCAAATAAGGCTTCGCAATGCCATGAACGGAGGGCACAACCAATTTTTCTTTGGAGGAATGAATGGTCAATTCCCTCAACGTTCAGGAAGTGGTGCAGGAAGCGGAGCCATTTCCCCAAGAGACAACTATGCATCAGTGAGAAGGGAGAACCGAGAGCTGAAGCTAGAAGTTGCAAGAATGAGAATGAGGCTCACTGACTTGGAGAAAGACCACGTTAACATGAAGCAAGAGCTAGTAAGGTCTCACCCTGCCAACAAGCTATTCAAATCACTCACCAAAAAACTAAGCAAACTCAATGCTCTATTTCGGATCAACAGTATTAAGCCAAATGGCTCAGAGAGTCGCTTCCCTTTCCCCAAGAGAAGGCGTCACTCAGTTTCATGA 1836 0.4248 MSTPCNNSARFVNYRPISDVSSDLTIEVGASSFALHKFPLVSRSGRIRKILLEAKDSKVSRISLPSVPGGAEAFELAAKFCYGINVEFTLSNVAMLKCVAHFLEMTEEFSEKNLETRAEAYLKETVLPNISNTISVLHRCETLIPTSEEISLVSRLINAIANNACKEQLTTGLQKLDHNFPSKTTTNMEPETPAEWWGKSLNVLSLDFFQRVLSAVKSKGLKQDMISKILINYAHNSLQGIVRDHHAVKGCFPDLELQKKQRVIVEAISGLLPTQSRKSPVPMAFLSSLLKAAIAASTSTSCRSDLERRIGLQLDQAILEDILIPTNSHQNTHGTIYDTDSILRIFSNFLNLDEEDEEDNSHLRDESEMVYDFDSPGSPKQSSILKVSKLMDNYLAEVALDPNLLPSKFISLAELLPDHARIVSDGLYRAVDIFLKVHPNIKDSERYRLCKTIDCQKLSQEACSHAAQNERLPVQMAVQVLYFEQIRLRNAMNGGHNQFFFGGMNGQFPQRSGSGAGSGAISPRDNYASVRRENRELKLEVARMRMRLTDLEKDHVNMKQELVRSHPANKLFKSLTKKLSKLNALFRINSIKPNGSESRFPFPKRRRHSVS* 612
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac7g02578 611 Gene3D Potassium Channel Kv1.1; Chain A 11 128 IPR011333 -
Phac7g02578 611 PANTHER OS12G0117600 PROTEIN 18 569 IPR043454 -
Phac7g02578 611 Pfam BTB/POZ domain 21 124 IPR000210 GO:0005515
Phac7g02578 611 Coils Coil 527 561 - -
Phac7g02578 611 SUPERFAMILY POZ domain 4 107 IPR011333 -
Phac7g02578 611 ProSiteProfiles NPH3 domain profile. 195 487 IPR027356 -
Phac7g02578 611 ProSiteProfiles BTB domain profile. 22 90 IPR000210 GO:0005515
Phac7g02578 611 Pfam NPH3 family 195 463 IPR027356 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac7g02578 Phac-Chr7 29799228 29804274 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac7g02578 6 437 EF-hand Containing Proteins AT2G47860 59.091 3.41e-179 514
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac7g02578 - - gmx:100814622 1067.76
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phac7g02578 7 29799228 29804274 Phac7g02578 7 29799228 29804274 ECH
Phac1g02957 1 38189384 38194031 Phac7g02578 7 29799228 29804274 PCT