Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac1g02957 ATGTATGCCTGCAGCTGTAGTTTTTGCTTTATGTTGAAATTTCCAGGTTCTATGTTATGTAGTGATTCAGCCAGATTTGATTTTTGCAGGCCAATATCTGACGTATCTAGTGATCTCACCATCGAGGTAGGAGCATCAGCTTTCGCACTTCACAAGTTTCCTCTCGTTTCTCGGAGTGGAAGAATTCGGAAGCTGCTGCTAGAAGCAAAAGATTCAAAAGTTTTACGCATAAGTCTCCCAAATGTGCCAGGTGGAGCAGAGGCATTTGAGCTAGCTGCCAAATTTTGCTATGGAGTCAATGTTGAGTTCACTCTCTCAAATGTTGCCTTGCTACGTTGCACGGCTCATTTTCTTGAAATGACCGAAGAATTTGCAGAAAAAAACTTGGAATCCAGAGTTGAAGCATTCCTAAGGGACACAGTGCTCCCTAACATATCAAGCACAGTATATGTTCTTCACAGTTGTGAGACTCTTCTTCCAATGTCAGAGGAAATAAACCTAGTCAATAAGCTAATCAATGCAATTGCAAACAACGCGTGCAAAGAGCAGCTTACATCTGGATTACTAAAACTTGATCACACTTTCCCTTCCAAAACCACACCAAACATGGAGCCAGAAACACCCTCAGATTGGTGGGGGAAGTCTTTCAATGTTCTTAGTCTTGAGTTCTTCCAACGAGTTGTATCCGTTGTTAAGTCAAAGGGACTAAAACAGGACATGATCAGCAAGATATTGATGAACTATGCACATGGTTCTCTTCAGGGGATTGGTGTTAGAGACCCCCAAGTGGTGAAAGGAAGTCTTCATGACATGGAATTGCAAAAGAAGCAAAGAGTCGTTGTTGAAACCATAGTTGGCTTACTCCCAACTCACTCAAGGAAAAGCCCTGTTCCAATGGGATTCCTCTCAAGTTTGCTGAAAGCTGCAATAGCAGCACCTGCATCAACTCCTTGCAAATCTGATTTAGAGAGGCGAATTAGTCTTCAACTTGACCAGGCAATTCTTGAAGACATCTTAATCCCAACAAACTCACCCCAAAACACCCACAACACGATGTATGACACTGACTCAATTCTGAGGATCTTTTCTATTTATCTAAACATGGACGAGGAGGATGGAGAAGATAGTGATAACTACATTGATGAAAGCCAAATGTATGATTTTGACAGTCCTGGATCTCCAAAACAAAGCTCAATCACAAAGGTATCGAAATTGCTGGACAGTTATCTCGCTGAAGTAGCTCTAGACTCAAACCTGCTGCCTTCAAAATTCACAGCACTTGCAGAACTACTTCCAGATCATGCACGTGTTGCAAGTGATGGACTCTATAGAGCTGTTGACATCTTCCTTAAGGTCCATCCAAACATGAAGGAGTCAGAGAGGTACAGGTTATGCAAAACCATTGATTGTCAGAAACTATCTCAAGAAGCATGCAGCCATGCAGCACAGAATGAAAGGCTACCAGTGCAGATGGTGGTGCAGGTGCTTTACTTCGAGCAAATGAGGCTTCGAAACGCCATGAATGGAGGGCACAACCAATTATTCTTTGGACAGTTTCCTCAGCGTTCAGGAAGCGGTGCAGGGAGTGGAGCGATTTCCCCGAGAGATAACTATGCATCAGTGAGAAGAGAGAACAGAGAACTGAAGCTTGAAGTAGCAAGAATGAGAATGAGGCTGACTGACTTGGAGAAAGACCATGTGTGTATGAAGCAGGAGCTTGTTAAGTCTCACCCTGCCAACAAGTTGTTCAAATCATTCACCAGAAAGCTGAGTAAGCTGAATGCTCTATTCAGGATAAATAGCATTAAGCCAATTGGTGGGAAGGCTAGTTCAGAAACTCGCTTCCCTTTTCCAAAGCGAAGACGCCACTCCGTTTCATAA 1881 0.4312 MYACSCSFCFMLKFPGSMLCSDSARFDFCRPISDVSSDLTIEVGASAFALHKFPLVSRSGRIRKLLLEAKDSKVLRISLPNVPGGAEAFELAAKFCYGVNVEFTLSNVALLRCTAHFLEMTEEFAEKNLESRVEAFLRDTVLPNISSTVYVLHSCETLLPMSEEINLVNKLINAIANNACKEQLTSGLLKLDHTFPSKTTPNMEPETPSDWWGKSFNVLSLEFFQRVVSVVKSKGLKQDMISKILMNYAHGSLQGIGVRDPQVVKGSLHDMELQKKQRVVVETIVGLLPTHSRKSPVPMGFLSSLLKAAIAAPASTPCKSDLERRISLQLDQAILEDILIPTNSPQNTHNTMYDTDSILRIFSIYLNMDEEDGEDSDNYIDESQMYDFDSPGSPKQSSITKVSKLLDSYLAEVALDSNLLPSKFTALAELLPDHARVASDGLYRAVDIFLKVHPNMKESERYRLCKTIDCQKLSQEACSHAAQNERLPVQMVVQVLYFEQMRLRNAMNGGHNQLFFGQFPQRSGSGAGSGAISPRDNYASVRRENRELKLEVARMRMRLTDLEKDHVCMKQELVKSHPANKLFKSFTRKLSKLNALFRINSIKPIGGKASSETRFPFPKRRRHSVS* 627
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac1g02957 626 Gene3D Potassium Channel Kv1.1; Chain A 31 143 IPR011333 -
Phac1g02957 626 ProSiteProfiles BTB domain profile. 37 105 IPR000210 GO:0005515
Phac1g02957 626 Pfam BTB/POZ domain 36 122 IPR000210 GO:0005515
Phac1g02957 626 SUPERFAMILY POZ domain 33 122 IPR011333 -
Phac1g02957 626 Coils Coil 538 565 - -
Phac1g02957 626 ProSiteProfiles NPH3 domain profile. 210 502 IPR027356 -
Phac1g02957 626 PANTHER OS12G0117600 PROTEIN 33 580 IPR043454 -
Phac1g02957 626 Pfam NPH3 family 210 478 IPR027356 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac1g02957 Phac-Chr1 38189384 38194031 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac1g02957 31 452 EF-hand Containing Proteins AT2G47860 59.823 1.13e-175 505
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac1g02957 - - gmx:100776688 1103.97
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phac1g02957 1 38189384 38194031 Phac1g02957 1 38189384 38194031 ECH
Phac1g02957 1 38189384 38194031 Phac7g02578 7 29799228 29804274 PCT