Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac6g02851 ATGGATTTTGAATACATTTTGGGCGGAATTACAGCTTCTACTATGGTGCTTCTATTTGTTCTATTCAGTTCTGCATCAAAGAAGGAGGCCAAAGATTTAGCACATGCAGAAAATAATGGAGGCACTATGATAACAACAACAACAACATCGGAAAATGGAAACCAACATCAAGAAATTTCACCAAGCATGGATATCATCATTGTCGGTGCTGGGGTTGCTGGTGCAGCCCTTGCTTACACACTTGGCAAGGAAGGAAGGCGAGTGCATGTTATTGAAAGGGACTTGACTGAACCAGACAGGATTGTGGGGGAATTGCTACAACCTGGAGGTTATCTCAAGCTAATTGAGTTGGATCTTCAAGATTGTGTGGGTGAGATTGATTCTCAGCAAGTCTTTGGGTATGCTCTTTACAAGGATGGAAAAAATACCAAGCTTTCTTATCCCTTGGAAAAGTTTGACTCTGATGTTTCTGGAAGAAGCTTTCACAATGGCCGATTCATACAGAGACTGCGTGAAAAGGCTTCAACTCTTCCAAATGTAAAATTAGAACAAGGGACTGTGACATCTCTGCTAGAAGAAAATGGAATCATCAAAGGGGTAAACTACAAAACCAGGAGTGGACAAGAGCTCACAGCTAAGGCTCCCCTCACTATAGTATGTGATGGTTGTTTTTCCAACTTGAGACGTTCTCTCTGCAACCCAAAGGTTGATGTAGCATCTCATTTTGTTGGTCTGGTCCTAGAGAACTGCAATCTTCCATATGCAAACCATGGACACGTTATCTTGGGTGATCCTTCTCCCATTTTGTTTTATCCCATAAGTAGCACCGAGATTCGGTGTCTGGTTGATGTGCCTGCAGGCGAAAAATTACCTTCCCTTGGTAATGGTGACATGGCTCTTTATTTGAAAACAGTAGTAGCTCCACAGGTTCCCCCAGAGTTGCATGCTTCTTTTATAGCAGCAGTTGACAAAGGAAACATAAGATGCATGCCAAACAGAAGCATGCCTGCATCTCCATATCCCACACCTGGTGCCCTTCTCATGGGAGATGCCTTCAACATGCGTCACCCTTTAACTGGAGGAGGAATGACTGTGGCTTTGTCTGACATTGTTTTGCTAAGGAACCTTCTTAGACCCCTCCATGATCTTCATGATGCTAATGCTCTTTGCAAATATCTTGAATCATTCTACACCCTACGCAAGCCAATGGCATCTACAATAAACACATTAGCAGGGGCATTATACAAGGTGTTTTGTGCATCCCCTGACCCAGCTAGAAAGGAAATGCGTCAAGCTTGTTTTGATTATTTAAGCCTTGGAGGTGTTTTCTCAGATGGACCAATATCTCTACTCTCAGGCCTAAATCCTCGTCCATTAAGCTTGGTTCTCCACTTCTTTGCTGTGGCTATATACGGTGTTGCTCGCTTACTCATACCGTTTCCTTCTCCAAAACGCATGTGGATTGGAGCTAGATTGATTTCCGGTGCCTCTGCTATCATTTTCCCCATTATCAGGGCTGAAGGAATTAGACAAATGTTCTTCCCGGTGACTGTGCCAGCATATTACAGAACACCTCCTACCAATTTGCATGATTAA 1596 0.433 MDFEYILGGITASTMVLLFVLFSSASKKEAKDLAHAENNGGTMITTTTTSENGNQHQEISPSMDIIIVGAGVAGAALAYTLGKEGRRVHVIERDLTEPDRIVGELLQPGGYLKLIELDLQDCVGEIDSQQVFGYALYKDGKNTKLSYPLEKFDSDVSGRSFHNGRFIQRLREKASTLPNVKLEQGTVTSLLEENGIIKGVNYKTRSGQELTAKAPLTIVCDGCFSNLRRSLCNPKVDVASHFVGLVLENCNLPYANHGHVILGDPSPILFYPISSTEIRCLVDVPAGEKLPSLGNGDMALYLKTVVAPQVPPELHASFIAAVDKGNIRCMPNRSMPASPYPTPGALLMGDAFNMRHPLTGGGMTVALSDIVLLRNLLRPLHDLHDANALCKYLESFYTLRKPMASTINTLAGALYKVFCASPDPARKEMRQACFDYLSLGGVFSDGPISLLSGLNPRPLSLVLHFFAVAIYGVARLLIPFPSPKRMWIGARLISGASAIIFPIIRAEGIRQMFFPVTVPAYYRTPPTNLHD* 532
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac6g02851 531 PRINTS Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 342 357 - -
Phac6g02851 531 PRINTS Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 64 86 - -
Phac6g02851 531 PRINTS Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 213 228 - -
Phac6g02851 531 PRINTS Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 357 373 - -
Phac6g02851 531 Pfam Squalene epoxidase 213 487 IPR013698 GO:0004506|GO:0016020|GO:0050660
Phac6g02851 531 SUPERFAMILY FAD/NAD(P)-binding domain 63 439 IPR036188 -
Phac6g02851 531 Gene3D - 55 444 IPR036188 -
Phac6g02851 531 PANTHER SQUALENE MONOOXYGENASE 20 526 IPR040125 GO:0004506|GO:0016126
Phac6g02851 531 FunFam Squalene monooxygenase 2 57 438 - -
Phac6g02851 531 Pfam NAD(P)-binding Rossmann-like domain 67 93 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac6g02851 Phac-Chr6 25342621 25347106 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac6g02851 45 527 Miscellaneous Gene Families AT1G58440 77.019 0.0 783
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac6g02851 K00511 - gmx:100795027 931.013
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phac6g02851 6 25342621 25347106 Phac6g02851 6 25342621 25347106 ECH
Phac2g03277 2 34333335 34336867 Phac6g02851 6 25342621 25347106 PCT