Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac2g03277 ATGATGGATTATCAGTATATTTTAGGAGGGATCATGGTTTCTAGTTTCGCATTTTTGTATTTTGTGTACATTTTTGGAGCAAGAAAGGTCACAGATTCAAGTTTAATTCATGTAAAAAGTAACGAGTGTGAGAAGAAATCATCAGAAAGTGGAATATGCTCACACGAGGCTGCAGAAAGTACTGAAATCATCATTGTGGGTGCAGGCGTTGCTGGTGCTGCTCTTGCTTACACGCTTGGAAAGGATGGACGCCGAGTACATGTGATTGAAAGGGATTTGAGTGAACCTGACAGGATCGTGGGTGAATTGCTACAACCTGGGGGATATTTGAAGTTAATTGAGTTGGGTCTTCAGGATTGTGTAAGTGAAATTGATGCTCAGCAAGTCTTTGGGTATGCTCTGTATAAGGATGGCAAAAATACCAAGCTCCCTTATCCCTTGGAAAAATTTAGCTCTGATGTTTCTGGGAGAAGCTTTCATAATGGCCGTTTCATACAGAGAATGAGAGAAAAGGCCTCATCTCTTCCTAATGTCAATTTAGAACAAGGAACTGTCACATCTCTACTTGAAGAAAAAGGAACCATCACCGGGGTGCAGTACAAAACCAAAAGTGGACAAGAGTTCACAGCAAAGGCTCCCCTCACCATAGTATGTGATGGATGTTTTTCCAACTTGAGGCGTTCTCTTTGCAATCCTAAGGTTGACGTACCCTCTCATTTTGTTGGTCTGGTCTTGGAGAGTTGTGATCTTCCATATGCAAATCATGGACACGTGATCTTAGGTGATCCTTCACCCATTTTGTTTTATCCTATTAGTAGCACCGAGATTCGCTGTTTGGTTGATGTGCCTGGCCAAAAATTACCTTCCCTTGGCAATGGTGAAATGGCCAGTTATTTGAAAACTGTGGTAGCTCCTCAGGTTCCTAAAGAGCTGTATAGTTCTTTTATAGCAGCTGTTGACAAAGGAAACATAAGAACCATGCCAAATAGAAGCATGCCTGCCTCACCTCAACCCACGCCTGGTGCCCTTCTAATGGGAGATGCCTTCAATATGCGTCACCCTTTAACAGGAGGAGGAATGACTGTGGCTTTATCTGACATTGTTGTGCTAAGGGATCTACTTAAACCCCTTCGGAATCTGCATGATGCTTCTGCTCTTTGCAGATACCTTGAATCATTCTACACTCTACGCAAGCCAGTGGCATCCACAATAAACACACTAGCTGGGGCATTGTACAAAGTGTTTTGTGCATCTCCTGATCCAGCTAGAAAGGAAATGCGGCAAGCATGTTTTGATTACTTGAGCCTTGGAGGTGTTTTCTCTAATGGACCAATAGCTCTACTCTCTGGTCTAAATCCTTGTCCATTGAGTTTGGTTCTCCATTTCTTCGCGGTCGCTATATATGGTGTTGGCCGCTTGATCATACCATTTCCTTCTCTGAAACGGATGTGGATTGGAGCTAGATTGATTTCAAGTGCTTCAGGCATAATATTCCCGATTATTAAGGCTGAAGGAGTGAGACAAATGTTCTTCCCAGCAACTGTGGCAGCATATTACAGAGCTCCTCCTGTTCCTTGA 1578 0.4309 MMDYQYILGGIMVSSFAFLYFVYIFGARKVTDSSLIHVKSNECEKKSSESGICSHEAAESTEIIIVGAGVAGAALAYTLGKDGRRVHVIERDLSEPDRIVGELLQPGGYLKLIELGLQDCVSEIDAQQVFGYALYKDGKNTKLPYPLEKFSSDVSGRSFHNGRFIQRMREKASSLPNVNLEQGTVTSLLEEKGTITGVQYKTKSGQEFTAKAPLTIVCDGCFSNLRRSLCNPKVDVPSHFVGLVLESCDLPYANHGHVILGDPSPILFYPISSTEIRCLVDVPGQKLPSLGNGEMASYLKTVVAPQVPKELYSSFIAAVDKGNIRTMPNRSMPASPQPTPGALLMGDAFNMRHPLTGGGMTVALSDIVVLRDLLKPLRNLHDASALCRYLESFYTLRKPVASTINTLAGALYKVFCASPDPARKEMRQACFDYLSLGGVFSNGPIALLSGLNPCPLSLVLHFFAVAIYGVGRLIIPFPSLKRMWIGARLISSASGIIFPIIKAEGVRQMFFPATVAAYYRAPPVP* 526
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac2g03277 525 Pfam Squalene epoxidase 211 481 IPR013698 GO:0004506|GO:0016020|GO:0050660
Phac2g03277 525 PRINTS Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 339 354 - -
Phac2g03277 525 PRINTS Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 354 370 - -
Phac2g03277 525 PRINTS Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 62 84 - -
Phac2g03277 525 PRINTS Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 211 226 - -
Phac2g03277 525 FunFam Squalene monooxygenase 2 55 435 - -
Phac2g03277 525 SUPERFAMILY FAD/NAD(P)-binding domain 61 436 IPR036188 -
Phac2g03277 525 Gene3D - 49 415 IPR036188 -
Phac2g03277 525 PANTHER SQUALENE MONOOXYGENASE 21 523 IPR040125 GO:0004506|GO:0016126
Phac2g03277 525 Pfam NAD(P)-binding Rossmann-like domain 65 91 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac2g03277 Phac-Chr2 34333335 34336867 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac2g03277 47 524 Miscellaneous Gene Families AT1G58440 78.079 0.0 784
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac2g03277 K00511 - gmx:100808856 940.258
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phac2g03277 2 34333335 34336867 Phac2g03277 2 34333335 34336867 ECH
Phac2g03277 2 34333335 34336867 Phac6g02851 6 25342621 25347106 PCT