LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Phac6g02700	ATGCAGCGATTACCCACCAAGTTGATTGCGAAAATGGGTCGCCCAGCATGCGACGTGTTCATCAACCACCGTGGAATCGACACGAAGAGGAACGTTGCGGGGTTGTTGTACGATAATCTTACGAGGATGGGAGTGAGGTCGTTTTTGGACAGCATGAACATGAAACCTGGGGACAGGCTCTTCCACAACATTGATAGAGGCATTCTAGGTTGCAAGGTTGGTGTTGCCGTCTTTTCTCCTCGCTACTGTGACTCCTATTTCTGCCTCCACGAGCTCGCTCTTCTCATGGAGTCCAACAAAAGGGTCGTTCCCATTTTCTACGACGTCAAACCCTCCGAACTAAGGGTGAAGGACAACGGAACGTGCCCTCCGATGGACCTTCAGAGGTTCGCCTTCGCACTTGAAGAAGCAAAGAACACCGTGGGATTGACGTTTGATTCTTTGAACGGGGATTGGTCAAAGTTGCTAAGGAATGCTTCGGAAGCGGTGATCGTGAACTTGTTGGAGTTAGAGGAAGAAAGGAAGCACGCGAGGAAGCAACGTTGA	546	0.5037	MQRLPTKLIAKMGRPACDVFINHRGIDTKRNVAGLLYDNLTRMGVRSFLDSMNMKPGDRLFHNIDRGILGCKVGVAVFSPRYCDSYFCLHELALLMESNKRVVPIFYDVKPSELRVKDNGTCPPMDLQRFAFALEEAKNTVGLTFDSLNGDWSKLLRNASEAVIVNLLELEEERKHARKQR*	182

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Phac6g02700	181	Pfam	TIR domain	19	114	IPR000157	GO:0007165
	Phac6g02700	181	Coils	Coil	160	180	-	-
	Phac6g02700	181	Gene3D	-	8	140	IPR035897	-
	Phac6g02700	181	PANTHER	COP1-INTERACTING PROTEIN-RELATED	16	178	-	-
	Phac6g02700	181	SUPERFAMILY	Toll/Interleukin receptor TIR domain	16	142	IPR035897	-
	Phac6g02700	181	ProSiteProfiles	TIR domain profile.	15	160	IPR000157	GO:0007165
	Phac6g02700	181	SMART	till_3	16	162	IPR000157	GO:0007165

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Phac6g02700	Phac-Chr6	24631742	24632847	Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Phac6g02700	9	146	Miscellaneous Gene Families	AT1G57670	30.323	1.73e-16	74.3

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Phac6g02700	-		-	gmx:100806903	320.087

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Phac6g02700	6	24631742	24632847	Phac6g02700	6	24631742	24632847	ECH
	Phac2g03387	2	35381124	35382448	Phac6g02700	6	24631742	24632847	PCT