Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac2g03387 ATGCAACGTTTGCCAGCCACGTTGTGCCGCAAACTGGCTCCTTCAGTATGCGACGTGTTCATAAACCACCGTGGCATCGACACGAAGAGGAACATTGCGGGGTTGCTCTACAACAGCTTGACTAGGATGGAAGTGCGGTCGTTTTTGGACAGCATGAACATGAAACCTGGGGACAGATTGTTCGATCACATAGACAGGGCCATTCTCGGGTCTAAAGTGGGTGTTGCGGTGTTTTCACCACGTTACTGTGAGTCGTATTTTTGTCTCCATGAGCTCGCTCTTTTCATGGAGTCAAAGAAGAGGGTTATCCCCATCTTCTACGACGTGAAACCTTCGGAGCTTGTGGTCAAAGACAACGGAACTTGTCCTGCTAAAGAGCTTCAGAGGTTCTCTTTGGCACTCGAGGAAGCTAAATACACTGTTGGATTGACCTTTGATTCTTTGAAAGGGGACTGGTCGGAGATACTGAGAGATGCTTCAGATGCAGTGATCATGAACTTGCTGGAGGTAGAGGAAGAGCGAAAAACCATGAAGAGGAAACTGTGA 546 0.4817 MQRLPATLCRKLAPSVCDVFINHRGIDTKRNIAGLLYNSLTRMEVRSFLDSMNMKPGDRLFDHIDRAILGSKVGVAVFSPRYCESYFCLHELALFMESKKRVIPIFYDVKPSELVVKDNGTCPAKELQRFSLALEEAKYTVGLTFDSLKGDWSEILRDASDAVIMNLLEVEEERKTMKRKL* 182
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac2g03387 181 SUPERFAMILY Toll/Interleukin receptor TIR domain 15 138 IPR035897 -
Phac2g03387 181 Gene3D - 13 177 IPR035897 -
Phac2g03387 181 SMART till_3 16 149 IPR000157 GO:0007165
Phac2g03387 181 PANTHER COP1-INTERACTING PROTEIN-RELATED 13 178 - -
Phac2g03387 181 Pfam TIR domain 18 121 IPR000157 GO:0007165
Phac2g03387 181 ProSiteProfiles TIR domain profile. 15 160 IPR000157 GO:0007165
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac2g03387 Phac-Chr2 35381124 35382448 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac2g03387 12 146 Miscellaneous Gene Families AT1G57670 32.000 5.80e-16 72.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac2g03387 - - gmx:100798207 329.331
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phac2g03387 2 35381124 35382448 Phac6g02700 6 24631742 24632847 PCT