Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac6g02112 ATGGGAAACATGTCAAATGTGGCCGTCTTCTGTTTCTGTTTCTGTCTCTGGACCCTCTTGTTTTCTCTGGCGTCATCTGCACCCAACGATGGCTTGCGCAGGATTGGACTGAAAAAGATCAAATTGGACAGCGATGACGTTATGCGGTTTAAAGAATTGCGGTCTTTAGCCAGAAAGCATGATCTTCAGAACATTCTTCGCGGAGCTGCGGACCCCGATATTGTTGGCTTGAAGAACTACTTGGATGCTCAGTATTATGGTGAAATTGCAATTGGTACCCCTCCCCAGACGTTCACTGTGATTTTTGACACCGGTAGCTCTAATTTGTGGGTGCCGTCTTCTAAATGTTACCTCTCGCTTGCATGTTACACGCACGCTAAGTACAAGTCTAGCCAATCCAGTACCTACTCGGCAAATGGGACTTCTGCTGCAATTCAATACGGTAGTGGAAGAATTTCTGGTTTCTTTAGCAATGACAATGTCAGAGTTGGAGACCTAGTTATAAGCAACCAGGCATTTATTGAAGCAACTAGAGAACCTGGAGTTACATTTGTGGCAGCAAAGTTTGATGGTATACTAGGACTTGGATTTCAAGAGATATCAGTAGGAAATGCTGTTCCAGTGTGGTACAATATGGTTGAACAAGGTCTTGTAAAGGATCCAATATTTTCATTTTGGTTAAATCGTAAACCAGAAGAAGAGAATGGGGGTGAGATTGTTTTTGGTGGAGCTGATTCTGCTCACTACAGGGGCAAACATACTTATGTGCCAGTGACAAGAAAAGGATATTGGCAGTTTGACATGGGAGAGGTGCTTATTGCTGGTAAACCCACTGGATTCTGTGCTAGTGGCTGTTCTGCAATTGCGGACTCTGGAACTTCTTTGTTGGCTGGTCCAACGACTATAATTACTGAGATAAATCAAGCAATCGGAGCATCTGGAGTTGTAAGCAAAGAGTGCAAGTCTGTTGTCGAACAGTATGGACAAACAATCATGGAATTGCTCTTAGCTGAAGCAAAGCCTAACAAGATCTGCTCACAAATTGGATTGTGTTCCTTTGATGGGACTCGTGGTGTTAGCATGGGCATTGAGAGTGTGGTGGATAAGAACAAAAGAAACTCATCTGGTGCCATTCGGGATGCTGCTTGTTCAACATGTGAGATGGCTGTTATTTGGATGCAAAACCAGCTGAGGCAGAACCAGACAGAAGATCGGATAATAGACTATGTCAATGGGCTTTGTGATAAGTTGCCCAGCCCAATGGGACAATCATCCGTTGATTGTGGAAAACTCTCTTCAATGCCTATTGTTTCCTTCACTGTTGGTGGAAAGGTTTTTGACCTTTCCCCAAAGGAGTATATACTGAAGGTGGGAGAAGGTCCTGAAGCCCAATGCATCAGTGGCTTCATTGCTCTGGATGTGCCTCCTCCTCGTGGCCCTCTATGGATCCTTGGAGATGTCTTCATGGGGCGCTACCACACCATCTTTGATTATGGTCAGCAGAGAGTCGGATTTGCTGTAGCAGCATAG 1530 0.4471 MGNMSNVAVFCFCFCLWTLLFSLASSAPNDGLRRIGLKKIKLDSDDVMRFKELRSLARKHDLQNILRGAADPDIVGLKNYLDAQYYGEIAIGTPPQTFTVIFDTGSSNLWVPSSKCYLSLACYTHAKYKSSQSSTYSANGTSAAIQYGSGRISGFFSNDNVRVGDLVISNQAFIEATREPGVTFVAAKFDGILGLGFQEISVGNAVPVWYNMVEQGLVKDPIFSFWLNRKPEEENGGEIVFGGADSAHYRGKHTYVPVTRKGYWQFDMGEVLIAGKPTGFCASGCSAIADSGTSLLAGPTTIITEINQAIGASGVVSKECKSVVEQYGQTIMELLLAEAKPNKICSQIGLCSFDGTRGVSMGIESVVDKNKRNSSGAIRDAACSTCEMAVIWMQNQLRQNQTEDRIIDYVNGLCDKLPSPMGQSSVDCGKLSSMPIVSFTVGGKVFDLSPKEYILKVGEGPEAQCISGFIALDVPPPRGPLWILGDVFMGRYHTIFDYGQQRVGFAVAA* 510
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac6g02112 509 Gene3D Acid Proteases 33 243 IPR021109 -
Phac6g02112 509 PANTHER BETA-SITE APP-CLEAVING ENZYME, ISOFORM A-RELATED 21 506 IPR001461 GO:0004190|GO:0006508
Phac6g02112 509 SMART sapb_4 279 351 IPR008139 -
Phac6g02112 509 ProSitePatterns Eukaryotic and viral aspartyl proteases active site. 100 111 IPR001969 GO:0004190|GO:0006508
Phac6g02112 509 FunFam Lysosomal aspartic protease 361 508 - -
Phac6g02112 509 Pfam Saposin-like type B, region 2 318 351 IPR008138 -
Phac6g02112 509 ProSiteProfiles Peptidase family A1 domain profile. 85 506 IPR033121 -
Phac6g02112 509 FunFam Lysosomal aspartic protease 71 313 - -
Phac6g02112 509 CDD phytepsin 75 506 IPR033869 GO:0004190
Phac6g02112 509 SUPERFAMILY Saposin 316 418 IPR011001 -
Phac6g02112 509 PRINTS Pepsin (A1) aspartic protease family signature 237 250 IPR001461 GO:0004190|GO:0006508
Phac6g02112 509 PRINTS Pepsin (A1) aspartic protease family signature 91 111 IPR001461 GO:0004190|GO:0006508
Phac6g02112 509 PRINTS Pepsin (A1) aspartic protease family signature 287 298 IPR001461 GO:0004190|GO:0006508
Phac6g02112 509 PRINTS Pepsin (A1) aspartic protease family signature 482 497 IPR001461 GO:0004190|GO:0006508
Phac6g02112 509 Pfam Saposin-like type B, region 1 382 418 IPR007856 GO:0006629
Phac6g02112 509 Gene3D Acid Proteases 245 509 IPR021109 -
Phac6g02112 509 Gene3D - 315 418 - -
Phac6g02112 509 ProSiteProfiles Saposin B type domain profile. 315 355 IPR008139 -
Phac6g02112 509 Pfam Eukaryotic aspartyl protease 84 507 IPR033121 -
Phac6g02112 509 ProSiteProfiles Saposin B type domain profile. 379 420 IPR008139 -
Phac6g02112 509 SUPERFAMILY Acid proteases 33 508 IPR021109 -
Phac6g02112 509 FunFam Aspartic proteinase A1 315 418 - -
Phac6g02112 509 ProSitePatterns Eukaryotic and viral aspartyl proteases active site. 287 298 IPR001969 GO:0004190|GO:0006508
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac6g02112 Phac-Chr6 20900698 20905428 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac6g02112 K08245 - gmx:100801598 893.649
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phac6g02112 6 20900698 20905428 Phac6g02112 6 20900698 20905428 ECH
Phac6g02112 6 20900698 20905428 Phac3g01354 3 14820137 14827133 ECH