Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac3g01354 ATGGAGAAAAACATGAATGTGATCTCGTGGTGCTTGTTTGTGACGACCCTGTTGCTTTCTGCTGTGTCTTGCGCACCCAATGATGGGCTGCGTAGGATTGGGCTCAAGAAGATTAAATTGGACCCTAACAACAGGCTTGCTGCTCGAATTGGGTCCAAGGATGATTCTTTCCGTGCTTCTATTAGAAAGTTTCATCTCCAAAACAACTTTGGTGGGACTCAGGAGACCGATATTGTTGCCTTAAAGAATTACCTGGATGCACAGTATTTTGGTGAAATAGCCATTGGAACACCTCCTCAGAAGTTCACTGTCATTTTCGACACAGGCAGCTCTAATTTGTGGGTGCCATCATCCCGATGCACCTTTTCGGTTGCATGCTACTTCCATCCTAAGTATAGGTCTAGCAAATCAAGTACTTACAAGAAAAATGGCACTGCTGCTGCTATTCAATATGGTACGGGCGCAATTTCTGGTTTCTTTAGCTATGACAGTGTTAGAGTTGGTGACATAGTTGTAAAGAACCAGGAATTTATCGAAGCAACTAGGGAGCCGGGTGTTGTATTTTTGGCAGCCAAGTTCGATGGTATATTGGGACTTGGATTTCAAGAGATATCTGTTGGAAATGCTGTTCCAGTGTGGTACAACATGGTTGAACAAGGTTTTATTAAGGAACCAGTATTTTCATTTTGGTTCAACCGCAAACCAGAGGAAGAGGAAGAAGAAGGGGGTGAGATTGTTTTTGGGGGTGTTGACCCTGCTCACTATAAGGGAAAGCACACTTATGTGCCTGTGACCAGAAAAGGATATTGGCAGTTTGATATGGGAGATGTACTTATTGGTGGTAAACCCTCTGGATATTGTGCTGATGGCTGTTCAGCCATTGCAGACTCAGGGACTTCCTTATTGGCCGGTCCAACGACTATAATAACTATGATAAACGATGCAATTGGAGCAGCTGGAATTATGAGCCAAGAGTGTAAGACCGTTGTTGCAGAGTATGGACAAACAATTTTGAATTTGCTTTTGGCTGAAACACAGCCAAAGAAGATCTGTTCTCAAATTGGATTGTGCACCTTTGATGGGACTCGTGGTATTGATATGGGCATAGCGAGCGTTGTGGATGAGATTGCAAGGAAATCATCTGGTGGTCTTCATGATGCTGCTTGTTCTGCGTGTGAGATGGCGGTTGTTTGGATGCAGAACCAGCTGAGCCGAAATCAGACACAGGATCAGATACTAAGCTACATCAATCAGCTTTGCGATAAAATGCCTAGCCCAATGGGAGAATCTTCTATTGACTGTGGGAATATCTCCTCATTACCTGTGGTGTCCTTTACTATTGGTGGAAGAACATTTGACCTGCTCCCAGAGGAGTACATACTCAAGGTGGGCGAAGGCCCTGTGGCTCAGTGCATTAGTGGCTTTACTGCTATAGATATTCCACCTCCTCGTGGCCCTCTCTGGATCCTTGGTGACGTCTTCATGGGGCGTTATCACACAGTGTTTGATTTTGGTAATCTTAGAGTGGGATTTGCTGATGCAGCTTAA 1548 0.4451 MEKNMNVISWCLFVTTLLLSAVSCAPNDGLRRIGLKKIKLDPNNRLAARIGSKDDSFRASIRKFHLQNNFGGTQETDIVALKNYLDAQYFGEIAIGTPPQKFTVIFDTGSSNLWVPSSRCTFSVACYFHPKYRSSKSSTYKKNGTAAAIQYGTGAISGFFSYDSVRVGDIVVKNQEFIEATREPGVVFLAAKFDGILGLGFQEISVGNAVPVWYNMVEQGFIKEPVFSFWFNRKPEEEEEEGGEIVFGGVDPAHYKGKHTYVPVTRKGYWQFDMGDVLIGGKPSGYCADGCSAIADSGTSLLAGPTTIITMINDAIGAAGIMSQECKTVVAEYGQTILNLLLAETQPKKICSQIGLCTFDGTRGIDMGIASVVDEIARKSSGGLHDAACSACEMAVVWMQNQLSRNQTQDQILSYINQLCDKMPSPMGESSIDCGNISSLPVVSFTIGGRTFDLLPEEYILKVGEGPVAQCISGFTAIDIPPPRGPLWILGDVFMGRYHTVFDFGNLRVGFADAA* 516
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac3g01354 515 Gene3D Acid Proteases 250 515 IPR021109 -
Phac3g01354 515 PRINTS Pepsin (A1) aspartic protease family signature 243 256 IPR001461 GO:0004190|GO:0006508
Phac3g01354 515 PRINTS Pepsin (A1) aspartic protease family signature 293 304 IPR001461 GO:0004190|GO:0006508
Phac3g01354 515 PRINTS Pepsin (A1) aspartic protease family signature 488 503 IPR001461 GO:0004190|GO:0006508
Phac3g01354 515 PRINTS Pepsin (A1) aspartic protease family signature 95 115 IPR001461 GO:0004190|GO:0006508
Phac3g01354 515 ProSiteProfiles Peptidase family A1 domain profile. 89 512 IPR033121 -
Phac3g01354 515 Pfam Saposin-like type B, region 2 324 357 IPR008138 -
Phac3g01354 515 SUPERFAMILY Saposin 322 424 IPR011001 -
Phac3g01354 515 CDD phytepsin 79 513 IPR033869 GO:0004190
Phac3g01354 515 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 24 - -
Phac3g01354 515 FunFam Vacuolar aspartic proteinase 385 514 - -
Phac3g01354 515 ProSitePatterns Eukaryotic and viral aspartyl proteases active site. 104 115 IPR001969 GO:0004190|GO:0006508
Phac3g01354 515 Pfam Saposin-like type B, region 1 388 424 IPR007856 GO:0006629
Phac3g01354 515 ProSitePatterns Eukaryotic and viral aspartyl proteases active site. 293 304 IPR001969 GO:0004190|GO:0006508
Phac3g01354 515 FunFam Aspartic proteinase A1 321 424 - -
Phac3g01354 515 ProSiteProfiles Saposin B type domain profile. 385 426 IPR008139 -
Phac3g01354 515 PANTHER BETA-SITE APP-CLEAVING ENZYME, ISOFORM A-RELATED 19 512 IPR001461 GO:0004190|GO:0006508
Phac3g01354 515 Gene3D Acid Proteases 31 249 IPR021109 -
Phac3g01354 515 Gene3D - 321 424 - -
Phac3g01354 515 ProSiteProfiles Saposin B type domain profile. 321 361 IPR008139 -
Phac3g01354 515 Pfam Eukaryotic aspartyl protease 88 513 IPR033121 -
Phac3g01354 515 SUPERFAMILY Acid proteases 75 514 IPR021109 -
Phac3g01354 515 FunFam Lysosomal aspartic protease 75 319 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac3g01354 Phac-Chr3 14820137 14827133 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac3g01354 K08245 - gmx:100779619 941.799
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phac3g01354 3 14820137 14827133 Phac3g01354 3 14820137 14827133 ECH
Phac6g02112 6 20900698 20905428 Phac3g01354 3 14820137 14827133 ECH