Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac5g02478 ATGACCACCCTCCTTAGAACCATCCTCATTGCCCACAAGCTCCACCTTCGCTACCCCAAATGCATTTTCCCACCTCTCCTTGCTCACTACTCTGCAACGGCGGATTCCTCCGAAGCCGACCACACAGACAAACCAACAAACGAAACCCCCACCACCAGTTGGAGCAGATATGGAAACATCTACGCCCGCCCAGTTGTGCAGCAGAGCGATCACAGCGACGGAGATGAAAACCCTAGCGGTTTGAGGGGAAATGATGTAACAGTGGTGAAGAAAAAAGGGAAGGTGAAAGCTCAGTGGGTGTGCTCCGATTGTGGGCACACGACGGGGAAATGGTGGGGGACATGCCCGGAATGCGAAGTAACTGGCACAATGCAAGAGTTTCATGAGAGCAAATTAACTGACAAACCCAGAGGGGGGTTAGCCATTACCGAGGACGCAGTGGGCTCGTGGCTCCCACGACGACCCGAAGAGTTGCGCCCCGTCAAGTTGGAAGAGGTGAACCGTGGATTCAATCACGACAAATGGAGAATTCCTTTGTCTGGTTCCCTCGGAAATGAAGTTTCTACTGTGCTTGGTGGAGGTCTTGTACCAGGTTCTTTAACTTTAGTCGGTGGTGATCCTGGTATTGGGAAAAGTACTCTGTTGTTGCAGATTTCAGCAATGATAGCAAATGAATGCAGTGATGGTGAAACACCTCCAGTTGTATATGTCTCTGGTGAAGAGAGCCTTAAGCAAATTTGTGCTAGAGCTGATCGCCTCGGGATTATGTCCAATATTTATTTATATTCAAGTACTGATATTGAGGACATATTGAAGAAAACTCATGCTCTATCCCCTTGTGCTCTGGTGGTTGATTCAATACAAACTGTTTACCTGAATACAGTTATAGGAAGTGCTGGAGGGGTTACGCAGGTGAAAGAATGTACTGCAGCTTTGATGCGATTTGCTAAAACAACTAACATCTCAGTTATTTTGATTGGACATGTGACCAAATCTGGAGAGATAGCAGGACCTCGTGTCTTGGAGCATATTGTTGATGTCGTTTTGTATATGGAAGGCGAGAAGTACTCTCCCTATCGAATGCTTCGAGCAGTGAAAAATCGCTTTGGTTCCACCGATGAGCTTGCAGTTCTTGAGATGTCACAGTCGGGACTCCAGGTTGTTTCAAATGTTAGTGAAATGTTTCTCACTCAACAACACTCTGATTCAAATGTTTTAGCTGGACTTGCTATTGCTGTACTAATGGATGGTACAAGAACTTTTTTAGTTGAAATTCAGGCACTTTGCCTTGCACATTGCCCAGTTTCGAGTTCACAATCCAATGGGATCCCGCCAAACAAAGCTAATATTATTAAATGTGTACTTATAAAGCAAGCAGGTCTTCATCTCCAAGATAATGCCGTGCTTTTGAATGTTGTTAGCGGATTCACAGTGACAGAAACTGCTGGAGATCTTGCAATGGCAGCTGCAATTTGCAGCAGTTTCTTGGAGTTCCCTATTCCAGAGGGGACTGCTTTCATTGGTGAAGTTGGCCTTAGTGGAGAGCTTCGCATGGTTCCTAGAATTGATAAAAGGGTTAACACATTGGCGAAGTTGGGTTACAAAATGTGTGTAGTACCAAAGCAAGCGGAAAAGCTTTTAGAAACCGAAGGTCTAGAAAAAATGAAAGTTGTAGGTTGCAAGGATCTGAAAGAGGTCATTAACGCTGTATTTAGTAGATAG 1722 0.4518 MTTLLRTILIAHKLHLRYPKCIFPPLLAHYSATADSSEADHTDKPTNETPTTSWSRYGNIYARPVVQQSDHSDGDENPSGLRGNDVTVVKKKGKVKAQWVCSDCGHTTGKWWGTCPECEVTGTMQEFHESKLTDKPRGGLAITEDAVGSWLPRRPEELRPVKLEEVNRGFNHDKWRIPLSGSLGNEVSTVLGGGLVPGSLTLVGGDPGIGKSTLLLQISAMIANECSDGETPPVVYVSGEESLKQICARADRLGIMSNIYLYSSTDIEDILKKTHALSPCALVVDSIQTVYLNTVIGSAGGVTQVKECTAALMRFAKTTNISVILIGHVTKSGEIAGPRVLEHIVDVVLYMEGEKYSPYRMLRAVKNRFGSTDELAVLEMSQSGLQVVSNVSEMFLTQQHSDSNVLAGLAIAVLMDGTRTFLVEIQALCLAHCPVSSSQSNGIPPNKANIIKCVLIKQAGLHLQDNAVLLNVVSGFTVTETAGDLAMAAAICSSFLEFPIPEGTAFIGEVGLSGELRMVPRIDKRVNTLAKLGYKMCVVPKQAEKLLETEGLEKMKVVGCKDLKEVINAVFSR* 574
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac5g02478 573 Gene3D - 422 573 IPR014721 -
Phac5g02478 573 FunFam DNA repair protein radA isogeny 404 573 - -
Phac5g02478 573 MobiDBLite consensus disorder prediction 65 84 - -
Phac5g02478 573 Gene3D - 186 388 IPR027417 -
Phac5g02478 573 PRINTS DNA repair protein radA signature 285 309 - -
Phac5g02478 573 PRINTS DNA repair protein radA signature 435 458 - -
Phac5g02478 573 PRINTS DNA repair protein radA signature 189 217 - -
Phac5g02478 573 PRINTS DNA repair protein radA signature 359 385 - -
Phac5g02478 573 PRINTS DNA repair protein radA signature 324 352 - -
Phac5g02478 573 PRINTS DNA repair protein radA signature 101 125 - -
Phac5g02478 573 MobiDBLite consensus disorder prediction 35 55 - -
Phac5g02478 573 NCBIfam DNA repair protein RadA 94 564 IPR004504 GO:0003684|GO:0005524|GO:0006281
Phac5g02478 573 Pfam Subunit ChlI of Mg-chelatase 456 542 - -
Phac5g02478 573 Pfam AAA domain 190 333 - -
Phac5g02478 573 SUPERFAMILY Ribosomal protein S5 domain 2-like 366 571 IPR020568 -
Phac5g02478 573 FunFam DNA repair protein RadA 175 386 - -
Phac5g02478 573 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 189 380 IPR027417 -
Phac5g02478 573 ProSiteProfiles RecA family profile 1. 173 329 IPR020588 GO:0003677|GO:0005524|GO:0006281|GO:0140664
Phac5g02478 573 SMART AAA_5 197 355 IPR003593 GO:0016887
Phac5g02478 573 PANTHER DNA REPAIR PROTEIN RADA 59 572 - -
Phac5g02478 573 CDD RadA_SMS_N 99 388 - -
Phac5g02478 573 Pfam Rubredoxin metal binding domain 99 126 IPR041166 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac5g02478 Phac-Chr5 42916651 42926438 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac5g02478 K04485 - gmx:100791181 946.421
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phac5g02478 5 42916651 42926438 Phac5g02478 5 42916651 42926438 ECH
Phac5g02478 5 42916651 42926438 Phac10g01909 10 41461093 41469286 PCT