Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac10g01909 ATGTTTTCCTTCTCCATTTCTGGTTTCCCTCCATTCCCACTCCGCAGGGCATATCCAAGAGTAAGTGCAAGCTTTGGCATTGACACCCCACAGGGTCCCAATTCAAGCAGCCCTCATGGCTCGAATGCTAAATTTGATGAAGAATTTCGAAAGGGAAAGGAAAGAGGGAGGGGGATGGGTGGTGGTGATGGTGGTGGTGGGGTTGTTATTGGGAGGAAGAAGAAGTCGAAGGAGAAAGTTCAATGGGTTTGCAGCAATTGTGGGTTCAGTGCAGGGCAATGGTGGGGCGTGTGCCGATCATGCAATGTGTCTGGAACTATGAAAGAGGCCAAATTCAGTAGTGACGCTGATAGTATGATTAGTGGGTTTTCAGTATTGGAGGATGGTGTGGGGTCTTGGCTACCGCAACAGGAAGGAGAGTTACGTCCCTTGAGATTGGCAGAGGTAAACAAGGGACTTGATCATCACCATTGGAGAATTCCTTTGTCTGGTCCATTTGGAGATGAAGTTTCCAGAGTGCTTGGTGGTGGTCTCGTACCAGGCTCATTGACTTTAATTGGTGGTGATCCTGGTGTTGGGAAGAGTACTCTTTTGCTGCAGGTACGAATTATACTGGCAACTGGGATGATAGCTTCAATTATTGCAGAAGGGCACCATGATGGTGAAGCATCTCCAGTTGTATATGTCTCTGGCGAAGAGAGTGTTGAGCAAATTGGTAACAGAGCAGATCGTCTTAGGATTCAATCAGATATTTATTTATATTCAAGTAATGATGTTGAGGACATATTGAAGAAAGTTCAGCATCTCTCCCCTGGGGCTCTAATTGTTGATTCAATACAAACTGTTTATTTAAAAGGAATAATGGGAAGTCCTGGAGGGATTATGCAGGTGAAAGAATGCACTTCAGCTTTACTCCGATTTGCAAAGAAGACAAGCATCCCGGTTCTTTTGATTGGTCATGTGACAAAATCTGGAGACATTGCAGGACCTCGTGTCTTGGAGCATATTGTTGATGTTGTTCTGTATATGGAAGGTGAGAAGTACTCTTCCCATCGAATGCTTCGAGCTGTGAAAAATCGATTTGGATCCACTGATGAGCTTGGAGTTTTTGGGATGTCACATTCAGGACTTCAGGCTATTTCAAATGCCAGTGAAATGTTTCTCAGTGAGCAACATCTGGATTCAGAAATTTTAGCTGGACTAGCTGTTGCTGTAATCATGGATGGGTCCCGGACATTTCTTATTGAAATTCAGGCACTTTGTCTTTCTAGTTCAACAGGTTCAAGGCAAGTTAATGGTATCCAACTAAATAGAGCTGATATGATCATATCTGTTCTTATAAAGCAAGCAGGTCTTCGTCTCCGAGAACATGCTGTGTTTTTGAATGTTGTTAGTGGATTGACACTGGCTGAGACTGCTGGAGATCTTGCTATAGCAGCAGCAATTTGCAGCAGTTGCTTGGAAATCCCTATTCCAAATGACATTGCATTCATTGGTGAAATTGGCCTTGGTGGTGAGCTTCGCATGGTTCATAGAATGGATAAAAGGGTATATACGGTTGCAAAATTGGGTTTCAGAATGTGCATAGTACCCAAGGTGGCTGAAAAAGCTTTAGGAAGTGAAGGTTTAGAAAAGATGAAAGTTGTTGGTTGCAGGAATCTGAAAGAGGTTATTAACACTGTATTTCCCAATATAATGTTGAAAAGGAGGTAG 1713 0.4326 MFSFSISGFPPFPLRRAYPRVSASFGIDTPQGPNSSSPHGSNAKFDEEFRKGKERGRGMGGGDGGGGVVIGRKKKSKEKVQWVCSNCGFSAGQWWGVCRSCNVSGTMKEAKFSSDADSMISGFSVLEDGVGSWLPQQEGELRPLRLAEVNKGLDHHHWRIPLSGPFGDEVSRVLGGGLVPGSLTLIGGDPGVGKSTLLLQVRIILATGMIASIIAEGHHDGEASPVVYVSGEESVEQIGNRADRLRIQSDIYLYSSNDVEDILKKVQHLSPGALIVDSIQTVYLKGIMGSPGGIMQVKECTSALLRFAKKTSIPVLLIGHVTKSGDIAGPRVLEHIVDVVLYMEGEKYSSHRMLRAVKNRFGSTDELGVFGMSHSGLQAISNASEMFLSEQHLDSEILAGLAVAVIMDGSRTFLIEIQALCLSSSTGSRQVNGIQLNRADMIISVLIKQAGLRLREHAVFLNVVSGLTLAETAGDLAIAAAICSSCLEIPIPNDIAFIGEIGLGGELRMVHRMDKRVYTVAKLGFRMCIVPKVAEKALGSEGLEKMKVVGCRNLKEVINTVFPNIMLKRR* 571
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac10g01909 570 MobiDBLite consensus disorder prediction 27 42 - -
Phac10g01909 570 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 170 372 IPR027417 -
Phac10g01909 570 PRINTS DNA repair protein radA signature 426 449 - -
Phac10g01909 570 PRINTS DNA repair protein radA signature 351 377 - -
Phac10g01909 570 PRINTS DNA repair protein radA signature 316 344 - -
Phac10g01909 570 PRINTS DNA repair protein radA signature 84 108 - -
Phac10g01909 570 PRINTS DNA repair protein radA signature 172 200 - -
Phac10g01909 570 PRINTS DNA repair protein radA signature 277 301 - -
Phac10g01909 570 MobiDBLite consensus disorder prediction 25 44 - -
Phac10g01909 570 Pfam AAA domain 173 325 - -
Phac10g01909 570 Gene3D - 168 383 IPR027417 -
Phac10g01909 570 Pfam Subunit ChlI of Mg-chelatase 443 532 - -
Phac10g01909 570 SMART AAA_5 180 347 IPR003593 GO:0016887
Phac10g01909 570 Gene3D - 397 569 IPR014721 -
Phac10g01909 570 PANTHER DNA REPAIR PROTEIN RADA 37 563 - -
Phac10g01909 570 FunFam DNA repair protein RadA 163 378 - -
Phac10g01909 570 FunFam DNA repair protein radA isogeny 396 565 - -
Phac10g01909 570 SUPERFAMILY Ribosomal protein S5 domain 2-like 358 562 IPR020568 -
Phac10g01909 570 ProSiteProfiles RecA family profile 1. 159 321 IPR020588 GO:0003677|GO:0005524|GO:0006281|GO:0140664
Phac10g01909 570 Pfam Rubredoxin metal binding domain 82 109 IPR041166 -
Phac10g01909 570 NCBIfam DNA repair protein RadA 77 556 IPR004504 GO:0003684|GO:0005524|GO:0006281
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac10g01909 Phac-Chr10 41461093 41469286 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac10g01909 K04485 - gmx:100794165 934.48
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phac10g01909 10 41461093 41469286 Phac10g01909 10 41461093 41469286 ECH
Phac5g02478 5 42916651 42926438 Phac10g01909 10 41461093 41469286 PCT