Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac5g02351 ATGAATTTGCAACAAGCTGGGCAGCCCAAATCCTCCAACGGATATGGCCGCCGAAAATCTGAAAGAGAAGGCGCAATTAAATCTGAGAATAAAATCCTGTCTGGCAAATTAAATGCCAGCAGATTAACAAATACAGGTGTGGTGATTGGCAGTAAAGGTGGCAATTGCGAGAGTCCTTCACATGATCGATTAGTATATCTAACAACATGTCTTATTGGGCACCAGGTGGAAGTCCAGGTGAAAAATGGATCCACATACTCTGGAGTCTTTCATGCAACAAACACAGACAAAGATTTTGGAATCGTTTTGAAAATGGCTCGCCTAACAAAAGACGGTTCATCACGAGGACAGAAATCTGGTGCAGAATTTGTCAGCAAGCCCCCTATCAAGATTTTAGTTATACCTGCCAAAGATCTTGTTCAAGTTACAGCACAGGATGTTGCTATTGCCAGGGATGGTTTACCAAATGAATCTCACCATGATATGCATCAGGAAATCATGGTTGATTCATTGATTTCTCAATCTCGTCATGTTGAGCTAGGGAGAGAATTAAAACCCTGGGTACCTGATGAAGATGATCCACAATGCCCAGAACTGGAAAACATATTTGATGGCCATTGGAACAGGGGATGGGATCAGTTTGAAACAAATGAGGCATTGTTTGGTGTCAAGAGCACGTTCGACGAGGAACTCTATACAACAAAGCTTGAAAAAGGGCCTCAGACAAGAGAATTGGAAAAGCAAGCTTTAAGAATAGCAAGAGAAATTGAGGGTGAGGAAACCCAAGATCTTCATCTCGCGGAGGAAAGAGGCTTTCACTTGCATGGAGACTTTGATCTTGATGAAGAAACTAGATTCTCTTCAGTTTATAGGGGTAAACGTGCTGATGACAGTGGATTTGATGAGGATGTACTGTTTGATTCCCACAATTCTGATACTTTTGGTGGTGTATTTGGTTCGGTTGTTAAGAGGTCTAGTGAGATTAGTGGTGGAAAAGGCAATGAAGGAGCTCGAACATTGGCAAATTCCTCTGTGGATCACACACAATCATCTCAGTCAAGTACCTGTGTTGATTTAAGCCGTTCTGGTTCTTATGATCACGCTAAGCAGTTAGCATCTGAACTCCCTGCCGTAAGCTATTCATCAGTGGAAGGGGAAAGCAGGATTCTGGAGAACTCAATTAGTAATCAACATGGAGACAATGATACCAAGGAAGCAACTCTGATTCAAGCTGAAGATGTTCAACTGTCAAAATCTGAGGATTCACAGGGACCACTCTACTTGAAGAAGGATGGCTCTGATAAAGGTGTATTATCTCCTAATGCTAGCTCCTATGCCCCTTCAATTCATACTACATCAATAGCTCATGAAATTTTACGGGGATCACGTGGAGATTTAATTGAGGGTTCAGCATCTGGCAAGGTTAATGGGGAAACAAAATCTGTAAATTCACGTGGGACCCCATATGGGTTAGATTCAGTTGGAGGCACTGCAGCATCTTCTGGTCCTGGCTTATCTCCAAGTTCATCAGTTGGTTCACTGTCTTCTGAAAAGTCAACTCTGAATCCCAATGCAAAGGAATTCAAGCTTAACCCTAATGCAAAGAGTTTTGTTCCATCACCTGCTCGGCCTCCCACTCCAGTGTCCGATGGTTCCTTCTATTTTCCAACTACTGTAACTACTGTACCAAGTATGCCAGGCATGCCCATGGGTATTGGAATTGGACCTACTTTTGCTGGTCCGCAACCTATGATGTATAATCCTCAGGTAGCACCAATGCCGTCTCAAGCATATTTTCATCCGAATGCACCACAGTATGGACAGCTCCTTGGTCATCCTAGGCAAGCTTTATACATGCCGAGTTACCTGCCCGAAATGCCATACAAGGGTCGGGACTATTGA 1902 0.4322 MNLQQAGQPKSSNGYGRRKSEREGAIKSENKILSGKLNASRLTNTGVVIGSKGGNCESPSHDRLVYLTTCLIGHQVEVQVKNGSTYSGVFHATNTDKDFGIVLKMARLTKDGSSRGQKSGAEFVSKPPIKILVIPAKDLVQVTAQDVAIARDGLPNESHHDMHQEIMVDSLISQSRHVELGRELKPWVPDEDDPQCPELENIFDGHWNRGWDQFETNEALFGVKSTFDEELYTTKLEKGPQTRELEKQALRIAREIEGEETQDLHLAEERGFHLHGDFDLDEETRFSSVYRGKRADDSGFDEDVLFDSHNSDTFGGVFGSVVKRSSEISGGKGNEGARTLANSSVDHTQSSQSSTCVDLSRSGSYDHAKQLASELPAVSYSSVEGESRILENSISNQHGDNDTKEATLIQAEDVQLSKSEDSQGPLYLKKDGSDKGVLSPNASSYAPSIHTTSIAHEILRGSRGDLIEGSASGKVNGETKSVNSRGTPYGLDSVGGTAASSGPGLSPSSSVGSLSSEKSTLNPNAKEFKLNPNAKSFVPSPARPPTPVSDGSFYFPTTVTTVPSMPGMPMGIGIGPTFAGPQPMMYNPQVAPMPSQAYFHPNAPQYGQLLGHPRQALYMPSYLPEMPYKGRDY* 634
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac5g02351 633 ProSiteProfiles Sm domain profile. 63 148 IPR047575 GO:0003723
Phac5g02351 633 MobiDBLite consensus disorder prediction 415 446 - -
Phac5g02351 633 PANTHER ATAXIN 2-RELATED 35 628 IPR045117 GO:0003723
Phac5g02351 633 MobiDBLite consensus disorder prediction 336 360 - -
Phac5g02351 633 FunFam Polyadenylate-binding protein-interacting protein 3 65 138 - -
Phac5g02351 633 Coils Coil 242 262 - -
Phac5g02351 633 Pfam LsmAD domain 221 291 IPR009604 -
Phac5g02351 633 MobiDBLite consensus disorder prediction 467 549 - -
Phac5g02351 633 Pfam Ataxin-2 C-terminal region 517 529 IPR009818 -
Phac5g02351 633 MobiDBLite consensus disorder prediction 327 360 - -
Phac5g02351 633 Pfam Ataxin 2 SM domain 61 145 IPR025852 -
Phac5g02351 633 MobiDBLite consensus disorder prediction 474 490 - -
Phac5g02351 633 MobiDBLite consensus disorder prediction 499 529 - -
Phac5g02351 633 Gene3D - 68 132 - -
Phac5g02351 633 SMART LsmAD_2 221 292 IPR009604 -
Phac5g02351 633 MobiDBLite consensus disorder prediction 1 25 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac5g02351 Phac-Chr5 42192561 42199747 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac5g02351 - - gmx:100812754 1068.14
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phac5g02351 5 42192561 42199747 Phac5g02351 5 42192561 42199747 ECH
Phac5g02351 5 42192561 42199747 Phac10g01764 10 40347651 40358711 PCT