Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac10g01764 ATGAATTTGGATCAAATTGGGCAGCCTAAATCATCTAATGGATACATCCGTCGAAAATCTGAGAAAGAGGGGGCAACTAAGTCTGATTATAAGATCCCCTCTGGAAAGTCAAATGCCAGCAGCAGATTAGCGAGTACAGGTGTAGTGTCTGACAATAAAGGTGGTAGTTATGGGAGTCCTTCACATGATCGACTAGTATATTTAACATCATGCCTTATTGGGCAGCATGTGGAAGCCCAGGTGAAAAACGGATCTATATACTCTGGAATATTTCATGCAACAAATACTGACAAAGATTATGGAATCATTTTGAAAATGGCTTGTTTGACAAAGGATGGCTCCTTGCAAGGACAGAGATTTCGTGCAGAATCTTTCAGCAAAGCTCCTTCTAAGACTTTAATTATTCCTTCCAATGACCTTGTACAAGTTATAGCAAAGGATGTTTCTGTTTTCAGAGATGGCCAAACTAGTGCACCTCACTATGATGACATGCATCATGAGATCATGGTTGATTCAGTAATATCTCAATCTCGACATGTTGAGACAGGCAGAGAATTACAGCGATGGGTACCTGATGAAGATGATCCAGAATGCCCTGAACTGGAAAATATCTTTGATGGCCCTTGGAATAGGGGATGGGATCAGTTTGAAACGAACAAAATGTTATTCGGTGTAAAAAGCACATTCAATGAGGAGTTATATACAACAAAACTTGAAAAAGGGCCCGGGACAAGAGAGTTGGAAAAGCAAGCTTTAAGAATTGCAAGAGAAATTGAGGGTGAGGAAACCCAAGATCTCCATCTAGCAGAGGAAAGAGGCCTTTACCATAACTTCGATATTGATGAAGAAACCAGATTCTCTTCAGTCTATAGGGGTAACCTTGTTGATGATAGTGGATATGACGAAAATGAGGATAAGTTGGATTCGGATTCACACAATTCTGAAAGGTTTGATAATATTTATGGTTTAGTCATCAAGAGACCAGCTGAAGTAAGTGGTCAGAAAGGCAATAATGGAGCTCAAAAATTGGCAAATTTCTCCTCTGTGGATCACTCCGAGTTATCCCAGTCAAGAAGTGGTATGGATTTATGTCGTTCTGGTTCTAATGATCATGCTAAGCAGTTAGCATCTGAACACTCTGCCCAGAGTTGCTCATTTTCAGATGGTGAAAGCAGGATTCAGGAGAAGTCAGCTAATAACCTACATGGGGGCAATGATAATACTGTGGAAGAAAATTGGATACAAGCTGAGGATGTCCAACTGTCAAAATCTCAGGATTTACGGTCATCACTGGAGTCTAAGAAAGATGGTTCTGATGAAGGGGGGTTATCTTCTAATCATATTTTATTGAAGACTCCTGAAGAAAATGTGTCGGTTGGGGAAACAAAGTCTGTAATTGCACGTGGAAGACTAGGTACATCAACCTCTGGTCCTGGTCTATCACCAAGTTCTTCGGTTGGTTCCCTGTCTTCGGAGAAGTCAACTCTGAATCCCTATGCCAAGGAGTTCAAACTCAACCCTAATGCCAAAAGTTTTATGCCATCCCAAGCACATGCTAAGCCCCGCTCCCCAGTGTCTGATGGTTCCTTCTATTACCCAGCTACTGTATCTACCGTACCAAATATGCCAGCCATGCCCATGGGTATTGGAGTTGGAACTACTTTTGCAGGGCCACAACCTGTCATGTATAATCCACAAGTGGCACAAATGCCATCCCAACCATATTTTCATCCAAACGGACCACAGGAGATGCCGTATAAGGGACGGGATTATTGA 1776 0.4184 MNLDQIGQPKSSNGYIRRKSEKEGATKSDYKIPSGKSNASSRLASTGVVSDNKGGSYGSPSHDRLVYLTSCLIGQHVEAQVKNGSIYSGIFHATNTDKDYGIILKMACLTKDGSLQGQRFRAESFSKAPSKTLIIPSNDLVQVIAKDVSVFRDGQTSAPHYDDMHHEIMVDSVISQSRHVETGRELQRWVPDEDDPECPELENIFDGPWNRGWDQFETNKMLFGVKSTFNEELYTTKLEKGPGTRELEKQALRIAREIEGEETQDLHLAEERGLYHNFDIDEETRFSSVYRGNLVDDSGYDENEDKLDSDSHNSERFDNIYGLVIKRPAEVSGQKGNNGAQKLANFSSVDHSELSQSRSGMDLCRSGSNDHAKQLASEHSAQSCSFSDGESRIQEKSANNLHGGNDNTVEENWIQAEDVQLSKSQDLRSSLESKKDGSDEGGLSSNHILLKTPEENVSVGETKSVIARGRLGTSTSGPGLSPSSSVGSLSSEKSTLNPYAKEFKLNPNAKSFMPSQAHAKPRSPVSDGSFYYPATVSTVPNMPAMPMGIGVGTTFAGPQPVMYNPQVAQMPSQPYFHPNGPQEMPYKGRDY* 592
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac10g01764 591 SMART LsmAD_2 223 292 IPR009604 -
Phac10g01764 591 MobiDBLite consensus disorder prediction 15 29 - -
Phac10g01764 591 MobiDBLite consensus disorder prediction 572 591 - -
Phac10g01764 591 Pfam Ataxin 2 SM domain 62 146 IPR025852 -
Phac10g01764 591 Coils Coil 244 264 - -
Phac10g01764 591 PANTHER ATAXIN 2-RELATED 34 583 IPR045117 GO:0003723
Phac10g01764 591 Pfam LsmAD domain 223 291 IPR009604 -
Phac10g01764 591 MobiDBLite consensus disorder prediction 424 493 - -
Phac10g01764 591 MobiDBLite consensus disorder prediction 1 44 - -
Phac10g01764 591 MobiDBLite consensus disorder prediction 334 392 - -
Phac10g01764 591 MobiDBLite consensus disorder prediction 468 493 - -
Phac10g01764 591 MobiDBLite consensus disorder prediction 331 392 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac10g01764 Phac-Chr10 40347651 40358711 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac10g01764 - - gmx:100778053 910.983
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phac10g01764 10 40347651 40358711 Phac10g01764 10 40347651 40358711 ECH
Phac5g02351 5 42192561 42199747 Phac10g01764 10 40347651 40358711 PCT