Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac3g03413 ATGAGCAACGGGGAGCTCCTCAACATCGAACCTCTGGAACTCAAGTTCGCCTTTGAACTCAAGAAGCAGATCTCATGTTCTCTTCAGTTGTCTAATAAGACCGATGCCTATGTCGCCTTCAAGGTCAAAACAACCAATCCGAAGAAGTATTGTGTTCGTCCGAACACCGGAATTGTCTTGCCCCGATCTACATGTGATGTTATGGTTACCATGCAAGCACAAAGAGAGGCTCCGACTGATATGCAATGCAAGGATAAGTTTCTTCTTCAGAGCGTAAAAACTTTTGATGGTGCCAGTCCGAAGGACATCACTGCAGAAATGTTCAACAAGGAGGCGGGTCATGTGGTTGAGGAGAGCAAATTGAGAGTGCTGTATCTTCCTCCTCAACAACCACCGTCTCCAGTACCAGAAGGTTCTGAAGAAGGATCCTCACCTAGAGGTTCTGTTTCAGAGAATGGAAATGGCAACGGTTCTGACTTCACACAAGTAGCGAGAGGATTTACTGAGCGACCTGAGGCTCAAGAAAAATCTTCAGAGGCTAGAGCTCTTATCTCAAGACTGACTGAAGAAAAGAATAATGCAATTGAACAAAATAGCAAGCTCCGCCAGGAACTGGATCTACTGAAGCGGGAAGGCAATAAAAGTCGTGGTGGAGTCTCATATGTCATTGTCGTATTAATTGGCTTGCTTGGCATAATAATGGGGTATCTCTTGAAGAAGACCTAA 726 0.4504 MSNGELLNIEPLELKFAFELKKQISCSLQLSNKTDAYVAFKVKTTNPKKYCVRPNTGIVLPRSTCDVMVTMQAQREAPTDMQCKDKFLLQSVKTFDGASPKDITAEMFNKEAGHVVEESKLRVLYLPPQQPPSPVPEGSEEGSSPRGSVSENGNGNGSDFTQVARGFTERPEAQEKSSEARALISRLTEEKNNAIEQNSKLRQELDLLKREGNKSRGGVSYVIVVLIGLLGIIMGYLLKKT* 242
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac3g03413 241 Gene3D Immunoglobulins 2 130 IPR013783 -
Phac3g03413 241 ProSiteProfiles Major sperm protein (MSP) domain profile. 6 126 IPR000535 -
Phac3g03413 241 Coils Coil 238 241 - -
Phac3g03413 241 FunFam Vesicle-associated protein 1-1 1 129 - -
Phac3g03413 241 MobiDBLite consensus disorder prediction 126 162 - -
Phac3g03413 241 Coils Coil 177 211 - -
Phac3g03413 241 PIRSF VAMP_assoc_prot 1 240 IPR016763 GO:0005789
Phac3g03413 241 MobiDBLite consensus disorder prediction 143 162 - -
Phac3g03413 241 SUPERFAMILY PapD-like 2 141 IPR008962 -
Phac3g03413 241 PANTHER VESICLE-ASSOCIATED MEMBRANE PROTEIN-ASSOCIATED PROTEIN 5 237 IPR016763 GO:0005789
Phac3g03413 241 Pfam MSP (Major sperm protein) domain 7 111 IPR000535 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac3g03413 Phac-Chr3 34594488 34598044 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac3g03413 - - gmx:100527687 370.548
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phac3g03413 3 34594488 34598044 Phac3g03413 3 34594488 34598044 ECH
Phac3g03413 3 34594488 34598044 Phac2g00871 2 5513902 5518061 PCT