Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac2g00871 ATGACCGCCTCTCAACTCATCTCCGTTAGTCCCGACGAACTCCGCTTCCACTTTGAGTTGGAGAAGCAAACGTTTTGCGATCTTAAGGTCCTCAATAACACACAGAATCATGTTGCTTTCAAGGTCAAAACCACTTCTCCCAAGAAATACTTCGTACGACCAAACACCGGTGTCGTACACCCCTGGGACTCCTGTATCATCAGAGTCACCCTCCAAGCCCAACGGGAATACCCTCCAGACATGCAATGTAAAGACAAGTTTCTCTTACAGAGTACAATAGTGAATCCAAATACTGATGTTGACGACCTCCCACCAGATACTTTTAATAAGGAAAGTGGTAATTCAATAGAGGAGTTGAAATTAAGAGTTGCATATATCTCTGCTGCCTCACCCGAAGGATCTGAAGATGATGCATCAAGGAACTCACATAAACTTGATACCTCTTCTAGTCAGGCTTTACAGGATCTGAAGGAAGAAAGAGATGCCGCTGCCAGACAAACAAGACAACTGCAACAAGAACTGGACATGATGAAAAGACGAAGAAACCGAAAAAGTGATCCTGGCTTTTCCTTCATCTTTGCCATTTTTGTGGGTGTCCTTGGAGTTTTACTTGGCTTTCTTTTGAAACTTTTATTCTCTTCTCCATCTAGAGAATGA 657 0.4307 MTASQLISVSPDELRFHFELEKQTFCDLKVLNNTQNHVAFKVKTTSPKKYFVRPNTGVVHPWDSCIIRVTLQAQREYPPDMQCKDKFLLQSTIVNPNTDVDDLPPDTFNKESGNSIEELKLRVAYISAASPEGSEDDASRNSHKLDTSSSQALQDLKEERDAAARQTRQLQQELDMMKRRRNRKSDPGFSFIFAIFVGVLGVLLGFLLKLLFSSPSRE* 219
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac2g00871 218 Pfam MSP (Major sperm protein) domain 7 104 IPR000535 -
Phac2g00871 218 PIRSF VAMP_assoc_prot 1 155 IPR016763 GO:0005789
Phac2g00871 218 PIRSF VAMP_assoc_prot 127 210 IPR016763 GO:0005789
Phac2g00871 218 ProSiteProfiles Major sperm protein (MSP) domain profile. 6 126 IPR000535 -
Phac2g00871 218 PANTHER VESICLE-ASSOCIATED MEMBRANE PROTEIN-ASSOCIATED PROTEIN 5 207 IPR016763 GO:0005789
Phac2g00871 218 SUPERFAMILY PapD-like 3 131 IPR008962 -
Phac2g00871 218 MobiDBLite consensus disorder prediction 153 168 - -
Phac2g00871 218 Coils Coil 153 180 - -
Phac2g00871 218 MobiDBLite consensus disorder prediction 131 168 - -
Phac2g00871 218 Gene3D Immunoglobulins 2 128 IPR013783 -
Phac2g00871 218 FunFam Vesicle-associated protein 1-1 1 129 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac2g00871 Phac-Chr2 5513902 5518061 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac2g00871 - - gmx:100794270 365.54
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phac3g03413 3 34594488 34598044 Phac2g00871 2 5513902 5518061 PCT