Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac1g03194 ATGAGGAGACCTTCAACACTCGTGGATGTGCTTCTGGTACTTGCATTGCTCAGCTGTAGCCCATGGATAGTATGGAGCAACACACTTTGCCAAGAGACAAACGACGAAGTTCGACCTCACAGCGTCAGCATCACCGAATTTGGTGCAGTTGGCGATGGGGTCACTCTCAACACAAAAGCATTTCAAAATGCCATCTTCTACTTGAATTCCTTTGCTGACAAAGGTGGAGCCAAGCTTTTTGTCCCGGATGGTCGGTGGTTAACCGGTAGTTTTGATCTCATCAGTCATCTAACTTTGTGGTTGGACAAGGATGCAGTAATTCTTGGATCAACGAACCCTGAAGATTGGCCAGTTGTTGATCCTCTACCGTCTTATGGAAGAGGAAGAGAGTTGCCAGGTAGAAGGCATAAGAGCCTCATTTATGGGCGCAATTTGAGTGATGTGATCATAACAGGTAATAACGGGACTATCGATGGTCAAGGGAGTATCTGGTGGAGCATGTTTAGGAACAAAACTCTGGATTATACACGTCCCCATTTGATAGAATTGATGAACTCAACAGGGGTCCTCATTTCAAATTTAACCTTCTTGAATTCTCCATTTTGGACACTCCATCCTGTGTATTGCAGCCATGTTACAGTTCAGAAAGTGGCGATCTTTGCTCCTCTTGATTCTCCAAATACTGATGGGATTGATCCAGATTCTTCAGACAATGTTTGCATTGAAGACTGTTACATAAGCACTGGTGATGACCTGATTGCGATCAAGAGCGGGTGGGATGAGTATGGCATTGGATACGGTCGCCCCTGCACAAACATTATCATCCACAGGCTTGTTGGTAAAACTCAAACGAGTGCAGGGATTGCAATAGGAAGTGAGATGTCTGGTGGTGTATCTGAAGTTCATGTAGAAGATATTCAATTCTACGATTCACATACTGCAATCAGAATAAAGACGTCTCCTGGAAGGGGTGGTTATGTTAGAAACATCTATGTCTCAAACGTGACCTTGGCTAATGTGGATATTGCTATTAGGTTCACTGGTTTATATGGGGAGCATCCAGATGATGGTTATGACCCAAATGCTCTGCCTGTAATAGAAAAGATTACAATCAAGGATGTGGTGGGAGAGAATATCAAAACTGCAGGTCTTATAGAGGGTATAGAAGGTGACAATTTTGTGAACGTTTGCTTATCAAACATTGTCCTTAATGTGAGCTCAAACTATCCATGGAACTGCTCCTATGTTAAAGGATATTCTGACTTGGTTCTTCCAGAAGCTTGTGAGCCTCTCAAAGAAAGAATATTCCCTGAGCATTGTTCAGATTGTTACTATTTGTCAAATCAAATTCAGAGTTCGAAGAGCCAAAATAGAGGTGCTTGGTTTATGTCTTGGTAA 1398 0.427 MRRPSTLVDVLLVLALLSCSPWIVWSNTLCQETNDEVRPHSVSITEFGAVGDGVTLNTKAFQNAIFYLNSFADKGGAKLFVPDGRWLTGSFDLISHLTLWLDKDAVILGSTNPEDWPVVDPLPSYGRGRELPGRRHKSLIYGRNLSDVIITGNNGTIDGQGSIWWSMFRNKTLDYTRPHLIELMNSTGVLISNLTFLNSPFWTLHPVYCSHVTVQKVAIFAPLDSPNTDGIDPDSSDNVCIEDCYISTGDDLIAIKSGWDEYGIGYGRPCTNIIIHRLVGKTQTSAGIAIGSEMSGGVSEVHVEDIQFYDSHTAIRIKTSPGRGGYVRNIYVSNVTLANVDIAIRFTGLYGEHPDDGYDPNALPVIEKITIKDVVGENIKTAGLIEGIEGDNFVNVCLSNIVLNVSSNYPWNCSYVKGYSDLVLPEACEPLKERIFPEHCSDCYYLSNQIQSSKSQNRGAWFMSW* 466
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac1g03194 465 Gene3D - 26 418 IPR012334 -
Phac1g03194 465 SMART pbh1 298 319 IPR006626 -
Phac1g03194 465 SMART pbh1 209 235 IPR006626 -
Phac1g03194 465 SMART pbh1 327 348 IPR006626 -
Phac1g03194 465 SMART pbh1 270 292 IPR006626 -
Phac1g03194 465 SMART pbh1 236 268 IPR006626 -
Phac1g03194 465 SUPERFAMILY Pectin lyase-like 34 431 IPR011050 -
Phac1g03194 465 PANTHER PECTIN LYASE-RELATED 23 449 - -
Phac1g03194 465 Pfam Glycosyl hydrolases family 28 138 417 IPR000743 GO:0004650|GO:0005975
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac1g03194 Phac-Chr1 39426823 39431068 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac1g03194 1 465 Glycoside Hydrolase AT3G62110 67.230 0.0 647
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac1g03194 - - gmx:100782602 852.818
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phac1g03194 1 39426823 39431068 Phac7g03309 7 35347555 35351862 PCT