Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr8g3845 ATGCATAAACATGGTGGAAAGAAATCTAAGCAATCAAACTCTAAATCTAGTGGAGGTCACTCTCCAAGAAGAACTCGAAGCTCCTCACTTCGCCGCGGCTCCAGTCTCCGCCGGCCAGAATCTCCGCCGGAAAACGGAAACACCAGTCAAGGCGGCAAAACCAGCGTCGAAGTTGGGGAGTCTAGCGAGGAGAAGGAGATGTCGAGGTTGATGCTGAATCCGGTGAAGAATCACAAACCAGAAAAGTATGAGGATTTGGGATTGGATATTTCTTCTTCTCTGCTTTTCAGCTCGTTGGAGATGCATCTTCCACGGACGTTGCTCCGTGCGCCTCGTGACCAGAAAGCTTCATACATGCAAGAGATTTTGCATGAATACGCGCCTCCTGCATTGATATACAGAGATCAATTGCAAAAAGAATATAGAGAGAAGATAATGTCAAGTTATCAGCCTCTGCATCAAGAGTTGTATACTATGGATCCTGCAGCATTCTTTGTACCTACATTTCTGGAAGCAATTAATGATAATACAGAACAAAGCTTTAGAAGTATAATGTCTGAACCTGTCCCAGGCATTTTTACATTTGAAATGCTTCAACCACATTTTTGCGAGTTACTGATATCTGAGGCTGAACATTTTGAGAAGTGGGCATACAAAGCAAAATTATGCGTAATGCGTCCCAATACAATGAATAAATACGGTGTCGTACTTGATGACTTTGGCTTTCAAACCATGCTTAACAAGTTTATTGAAGATTTTATTTCTCCATTGTCGAAAGTGTTCTATGCAGAAGCTGGTGGAGCAACCCTGGATTCTCACCATGGGTTTATTGTTGAATGTGGTTTACATAGAGATGTTGAAACAGAATTCCATGTGGATGACTCAGAAGTTACCTTAAATGTTTGCCTGGGTAGGCAATTTTCTGGAGGAGAGTTGTATTTTCGGGGCTTGCGATGCGATAAACATTTACATACGATAAGTCATTCAGAGGAGATATTTGATTATTCGCATGTCCCTGGTTGTGCTGTGCTTCATCATGGCCGTCATCGCCATGGAGCTAGAGCCACATTTGCTGGTCATCGGTTCAACCTACTTCTGTGGTGCAGAAGTTCTTTTTATAGAGAAATGCAAAAGTTTAAAAGAGATTTCTCTGGCTGGTGTGTTGAGTGCAATCAAGAGAAGAAAGATAAGAAAGATAGGATGCTCTCGGCATATGATACTACCGGAATGGAAATATTGAGGGAAGGTGGAACAACTGCATAA 1263 0.4228 MHKHGGKKSKQSNSKSSGGHSPRRTRSSSLRRGSSLRRPESPPENGNTSQGGKTSVEVGESSEEKEMSRLMLNPVKNHKPEKYEDLGLDISSSLLFSSLEMHLPRTLLRAPRDQKASYMQEILHEYAPPALIYRDQLQKEYREKIMSSYQPLHQELYTMDPAAFFVPTFLEAINDNTEQSFRSIMSEPVPGIFTFEMLQPHFCELLISEAEHFEKWAYKAKLCVMRPNTMNKYGVVLDDFGFQTMLNKFIEDFISPLSKVFYAEAGGATLDSHHGFIVECGLHRDVETEFHVDDSEVTLNVCLGRQFSGGELYFRGLRCDKHLHTISHSEEIFDYSHVPGCAVLHHGRHRHGARATFAGHRFNLLLWCRSSFYREMQKFKRDFSGWCVECNQEKKDKKDRMLSAYDTTGMEILREGGTTA* 421
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr8g3845 420 MobiDBLite consensus disorder prediction 1 67 - -
Mtr8g3845 420 ProSiteProfiles Fe(2+) 2-oxoglutarate dioxygenase domain profile. 252 370 IPR005123 -
Mtr8g3845 420 SMART p4hc 190 369 IPR006620 GO:0005506|GO:0016705|GO:0031418
Mtr8g3845 420 PANTHER 2-OXOGLUTARATE (2OG) AND FE(II)-DEPENDENT OXYGENASE SUPERFAMILY PROTEIN-RELATED 51 407 - -
Mtr8g3845 420 PANTHER 2-OXOGLUTARATE AND IRON-DEPENDENT OXYGENASE DOMAIN-CONTAINING PROTEIN 2 51 407 - -
Mtr8g3845 420 MobiDBLite consensus disorder prediction 32 57 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr8g3845 Mtr-Chr8 49113671 49126114 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr8g3845 - - mtr:MTR_8g106610 763.451
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr8g3845 8 49113671 49126114 Mtr6g2122 6 37922709 37929610 ECH
Mtr8g3845 8 49113671 49126114 Mtr8g3845 8 49113671 49126114 ECH
Mtr8g3845 8 49113671 49126114 Mtr6g2122 6 37922709 37929610 PCT