Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr6g2122 ATGCCCCCACACGGTGGCGATTCCACCACCGTAACCGGTAACGGAACAATGGCGAATTCGAGAATGAGGCTGAGATTGAACCCTAACAAGGATCACAAACCAGAAGGTTACGATGATCTTGAATTGGATTTCAGTCCTTCGATTTTCAGCTCGTTGGAGAAACATCTTCCTCCGAATATGCTCGTTTTTTCGCGTGATGATAAAGCTAAATTCATGCGTGAGATTTTGCTCAAGTATCTTCCTAATGGTGAACGTCACAGAACTCAGAAGCATAAAGAATACAGACAGAAGATAAATTCACATTATCAGCCTTTGCATCACGAGTTGTACACTTTGAATCCTACGGCATTCTTTGTGCCGACATTTCTGAAAGCAATAAGTGATAATACAGAGCAAAGCTTTAGAAGCATAATATCCGAGCCCTCTCCAGACATTTATGTATTTCAAATGTTTCAGCCAGAGTTTTGTGAGTTGCTGCAAGCTGAGATTGAAAATTTTGAGAAATGGGTGGCTGAAGCAAAATTTCGGATCATGCGTCCCAATAGAATGAATAAATATGGTGCTGTACTTGATGACTTTGGCCTTGAACCAATGCTTGACAAGCTTATGGATGATTTTGTTCGTCCTTTATCTAGAGTCTTCTATCCAGAAGTTGGAGGAGCAACCTTGGATTCACATCATGGATTTGTTGTTGAATATGGTGAAGATAAAGATCTTGATTTGGGTTTCCATGTGGATGACTCGGAAGTAACCCTGAATGTTTGCTTGGGTAAGGAATTTTCTGGAGGGGAGTTGTTTTTTCGAGGAACAAGATGTGAGAAACATGTAAATACAGGAAGTCAACCAGAGGAAGTCTTTGATTATTCCCATGTCCCTGGACGGGCTGTGCTTCATCGTGGTCGACACCGTCATGGTGCTAGAGCGACAACATCTGGGCATCGAATGAACTTCCTTATGTGGTGCAGAAGTTCTGTCTTCAGAGAGATGAAACTGCATCAAAAGGATTTTTCCAGTTGGTGTGGTGAATGCAACCGCATGAAAATGGAAAGACAACGCTCCACATGTGCTGCTACCAGATTGGAGTTGATCGCAAAGGAAGGCGAATCCACTGCGTAG 1116 0.4265 MPPHGGDSTTVTGNGTMANSRMRLRLNPNKDHKPEGYDDLELDFSPSIFSSLEKHLPPNMLVFSRDDKAKFMREILLKYLPNGERHRTQKHKEYRQKINSHYQPLHHELYTLNPTAFFVPTFLKAISDNTEQSFRSIISEPSPDIYVFQMFQPEFCELLQAEIENFEKWVAEAKFRIMRPNRMNKYGAVLDDFGLEPMLDKLMDDFVRPLSRVFYPEVGGATLDSHHGFVVEYGEDKDLDLGFHVDDSEVTLNVCLGKEFSGGELFFRGTRCEKHVNTGSQPEEVFDYSHVPGRAVLHRGRHRHGARATTSGHRMNFLMWCRSSVFREMKLHQKDFSSWCGECNRMKMERQRSTCAATRLELIAKEGESTA* 372
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr6g2122 371 PANTHER 2-OXOGLUTARATE AND IRON-DEPENDENT OXYGENASE DOMAIN-CONTAINING PROTEIN 2 15 370 - -
Mtr6g2122 371 SMART p4hc 143 322 IPR006620 GO:0005506|GO:0016705|GO:0031418
Mtr6g2122 371 Gene3D q2cbj1_9rhob like domain 141 323 - -
Mtr6g2122 371 MobiDBLite consensus disorder prediction 7 23 - -
Mtr6g2122 371 PANTHER 2-OXOGLUTARATE (2OG) AND FE(II)-DEPENDENT OXYGENASE SUPERFAMILY PROTEIN-RELATED 15 370 - -
Mtr6g2122 371 MobiDBLite consensus disorder prediction 1 34 - -
Mtr6g2122 371 ProSiteProfiles Fe(2+) 2-oxoglutarate dioxygenase domain profile. 224 323 IPR005123 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr6g2122 Mtr-Chr6 37922709 37929610 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr6g2122 - - jre:108982218 587.415
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr8g3845 8 49113671 49126114 Mtr6g2122 6 37922709 37929610 ECH
Mtr6g2122 6 37922709 37929610 Mtr6g2122 6 37922709 37929610 ECH
Mtr8g3845 8 49113671 49126114 Mtr6g2122 6 37922709 37929610 PCT