Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr8g3561 ATGGCGGATGGACCCATCATCCCCACCACCAGACCAAAAAGACCACGACCACCTTCCGGCCGTACCAACCTAGCCTCATGTGTAGTAGCCACAATCTTCTTGATTTTCATCATCATCGTCATCCTCATAGTATACTACACAGTTTTCAAACCACAAGACCCCAAGATCGCCGTCAACGCCGTCCAACTCCCCTCCTTCTCCGTCATTAACGGCACCGTCAACTTCACCTTCTCTCAATACGCCTCCGTTAGAAACCCTAACCGTGCTGCTTTCTCTCACTACGACAGCTCTCTGGAAATCCTCTACTCCGGTAACCAAGTCGGGTTCATGTTCATTCCCGCCGGCCAGATCGACGCCGGGAGAACACAGTACATGGCTGCAACGTTCTCAGTTCAGTCTTTTCCTTTGTCGGCACCGCCAAATATGGGTCCCACTTTGGCGAATGGTGACGGTGTTGGGTTTAACTTTGGGTTGAGAGTTCAACCAACGATGGAGATTGAGTCGAAGTTGGAAATGGCGGGGCGTGTTAGGGTTTTGCATTTCTTCACTCATCGTGTTAAGGTTAGAACTGGTTGCAGAGTTGCCATAGCTGTCAGTGATGGTTCTGTCTTAGGGTTTCATTGCTAA 627 0.5008 MADGPIIPTTRPKRPRPPSGRTNLASCVVATIFLIFIIIVILIVYYTVFKPQDPKIAVNAVQLPSFSVINGTVNFTFSQYASVRNPNRAAFSHYDSSLEILYSGNQVGFMFIPAGQIDAGRTQYMAATFSVQSFPLSAPPNMGPTLANGDGVGFNFGLRVQPTMEIESKLEMAGRVRVLHFFTHRVKVRTGCRVAIAVSDGSVLGFHC* 209
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr8g3561 208 PANTHER OS05G0238400 PROTEIN 15 208 - -
Mtr8g3561 208 Pfam Late embryogenesis abundant protein 82 190 IPR004864 -
Mtr8g3561 208 MobiDBLite consensus disorder prediction 1 20 - -
Mtr8g3561 208 PANTHER LATE EMBRYOGENESIS ABUNDANT (LEA) HYDROXYPROLINE-RICH GLYCOPROTEIN FAMILY 15 208 - -
Mtr8g3561 208 SUPERFAMILY LEA14-like 34 134 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr8g3561 Mtr-Chr8 46186768 46187782 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr8g3561 - - cam:101495352 368.237
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr8g3561 8 46186768 46187782 Mtr8g3561 8 46186768 46187782 ECH
Mtr5g0231 5 2127157 2127976 Mtr8g3561 8 46186768 46187782 PCT