Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr5g0231 ATGACCAAACATGAACATGAAACACCACCGTCAAACCGAACAAACCTAGCTTCATGTTTGGTCGCCACCGTTTTCTTAATCTTCATTCTCATCATAATCTTCACACTTTACTTCACACTTTTCAAACCACAAGATCCAAAAATTTCCGTCACCGCCGTTCAACTCCCATCATTCAACCTCACCAACAACTCCACCACCGTCAACTTCACCTTCTCTCAATACACTTCTGTTAAAAACCCTAACAGAGGAACATTCTCACACTACGACAGTTCCTTTCAGCTTCTCTCCTATGGAAAACAAATCGGTTTCATGTTCGTTCCTGCTGGGAAGATCAATGCAAGAAGAACTCAGTTCATGGCTGCTACATTCACTGTTCAATCTCTTCCGTTGAACTTGGAGCCCGAAGGGCTTCAAATGGGGCCCACTGTGGAGATTGAATCTACGATTGAAATGGTTGGGAGAGTGAGAGTGTTGCATCTGTTCAGTCATCATGTGGAAGCTAAAGCTGATTGCAGAGTTGCCATTGCTGTTTCAGATGGATCTGTCTTAGGTTTTCATTGCTAA 564 0.4326 MTKHEHETPPSNRTNLASCLVATVFLIFILIIIFTLYFTLFKPQDPKISVTAVQLPSFNLTNNSTTVNFTFSQYTSVKNPNRGTFSHYDSSFQLLSYGKQIGFMFVPAGKINARRTQFMAATFTVQSLPLNLEPEGLQMGPTVEIESTIEMVGRVRVLHLFSHHVEAKADCRVAIAVSDGSVLGFHC* 188
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr5g0231 187 SUPERFAMILY LEA14-like 26 126 - -
Mtr5g0231 187 PANTHER LATE EMBRYOGENESIS ABUNDANT (LEA) HYDROXYPROLINE-RICH GLYCOPROTEIN FAMILY 6 187 - -
Mtr5g0231 187 PANTHER LATE EMBRYOGENESIS ABUNDANT HYDROXYPROLINE-RICH GLYCOPROTEIN 6 187 - -
Mtr5g0231 187 Pfam Late embryogenesis abundant protein 76 171 IPR004864 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr5g0231 Mtr-Chr5 2127157 2127976 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr5g0231 - - cam:101503027 263.848
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr5g0231 5 2127157 2127976 Mtr5g0231 5 2127157 2127976 ECH
Mtr5g0231 5 2127157 2127976 Mtr8g3561 8 46186768 46187782 PCT