Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr8g3558 ATGTCAAACAAAACCATTCTGGTTACCGGCGGAGCCGGTTACATCGGCAGCCACACAGTCCTCCAGCTTCTTCTCGGCGGTTACAAAGTCGTCGTGGTGGATAATCTTGATAATTCTTCTCAAAAATCCATCGACAGAGTTAAGAAACTCGCCGGTGATTTCGCCGGTAACCTTTCCTTTCATAAGTTAGACCTGCGGGACAGAGATGGACTTGAGAAAATATTTTCTTCCACAAAATTTGATGCTGTCATACATTTTGCTGGACTGAAAGCAGTAGGTGAAAGTGTGCAGAAACCACTGCTCTACTATGACAACAACTTGATCGGGACAATTGTTCTATTTGAAGTCATGGCTGCCCATGGATGCAAGAAGCTTGTGTTCTCCTCTTCAGCCACTGTATACGGTTGGCCAAAGGAGGTCCCCTGCACTGAAGAGTTTCCTTTATCGGCTGCAAGCCCATATGGACGAACCAAGCTATACATTGAAGAAATTTGTCGTGATATCTACCGTTCTGATCCAGGATGGAAAATAACACTGTTGAGATACTTCAACCCCGTTGGTGCACATCCCAGTGGTCATATTGGTGAGGATCCTCGCGGAATTCCCAACAACCTCATGCCTTTTGTTCAGCAAGTTGCAGTTGGCAGACGCTCTGCATTGACAGTTTTTGGAACAGATTATAGCACAAGTGATGGAACTGGAGTCCGTGATTACATTCATGTTGTTGATTTAGCTGATGGGCACATTGCTGCATTGTGTAAGCTAGATGATCCTAAGACAGGTTGTGAGGTTTATAACTTGGGAACAGGAAAGGGAACATCAGTTTTGGAGATGGTTGCAGCTTTTGAACAGGCCTCTGGAAAGAAAATTCCAATTGTAAAGGCTGATCGGAGACCTGGAGATGCTGAAGTTGTTTATGCATCAACAGAAAAAGCAGCAAAAGAACTTAACTGGAAGGCTAAATATGGCATTGATGATATGTGCCGTGATCAATGGAATTGGGCTAGCAAAAACCCTTATGGCTATGGTGAATCTGAAAAGTGA 1044 0.4416 MSNKTILVTGGAGYIGSHTVLQLLLGGYKVVVVDNLDNSSQKSIDRVKKLAGDFAGNLSFHKLDLRDRDGLEKIFSSTKFDAVIHFAGLKAVGESVQKPLLYYDNNLIGTIVLFEVMAAHGCKKLVFSSSATVYGWPKEVPCTEEFPLSAASPYGRTKLYIEEICRDIYRSDPGWKITLLRYFNPVGAHPSGHIGEDPRGIPNNLMPFVQQVAVGRRSALTVFGTDYSTSDGTGVRDYIHVVDLADGHIAALCKLDDPKTGCEVYNLGTGKGTSVLEMVAAFEQASGKKIPIVKADRRPGDAEVVYASTEKAAKELNWKAKYGIDDMCRDQWNWASKNPYGYGESEK* 348
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr8g3558 347 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 1 341 IPR036291 -
Mtr8g3558 347 TIGRFAM galE: UDP-glucose 4-epimerase GalE 6 340 IPR005886 GO:0003978|GO:0006012
Mtr8g3558 347 CDD UDP_G4E_1_SDR_e 5 334 IPR005886 GO:0003978|GO:0006012
Mtr8g3558 347 Pfam GDP-mannose 4,6 dehydratase 7 330 IPR016040 -
Mtr8g3558 347 Gene3D - 6 275 - -
Mtr8g3558 347 PANTHER UDP-GLUCOSE 4-EPIMERASE 5 1 346 - -
Mtr8g3558 347 Gene3D - 194 335 - -
Mtr8g3558 347 PANTHER UDP-GLUCOSE 4-EPIMERASE 1 346 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr8g3558 Mtr-Chr8 46161567 46165915 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr8g3558 5 319 Miscellaneous Gene Families AT4G00110 28.228 1.07e-22 96.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr8g3558 K01784 - zju:107429837 624.009
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr8g3558 8 46161567 46165915 Mtr8g3558 8 46161567 46165915 ECH
Mtr5g0235 5 2143911 2147706 Mtr8g3558 8 46161567 46165915 PCT