Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr5g0235 ATGGCTTCTCGCGTCGGCATCACTAATGGCACCTCTTCTCCTTTAAACTCTTCACGTTTTCTATCACCTTCTAAGAATTCTTCATTCCAAACCCAAAACGGTAGTAATTCTAATTCTGCTTCTCTCATGACGCAAAACAAAACCGTTCTAGTTACCGGCGGTGCCGGTTACATCGGTAGCCACACCGTTCTTCAGCTCTTACTCGGCGGTTTCAAAACTGTCATCGTTGATAATCTTGATAATTCCTCTGAAGTTGCTGTTCGTAGAGTTAAGGAACTCGCTGCTGAATTTGGGAAAAACCTCAATTTTCACAAGGTAGACCTCCGCGACAAGGCTGCACTTGAGCAAATTTTTTCTTCCACCAAGTTTGATGCAGTTATACATTTTGCTGGAATGAAAGCAGTGGGAGAAAGTGTGCAGAAACCGTTACTCTACTACAACAACAACTTGATTGGGACAATCACTCTTTTGGAAGTCATGGCTGCTCATGGATGCAAGAAGCTTGTGTTCTCATCTTCAGCCACTGTATATGGTTGGCCAAAGGAGGTTCCATGTACTGAAGAGTTTCCTCTGTCAGCAGCAAACCCATATGGACGAACCAAGCTCACCATTGAAGAAATCTGTCGTGATGTCAATCGTGCTGATCCAGATTGGAAAATAATGTTATTGAGATACTTCAACCCAGTGGGTGCACACCCTAGTGGTTATATTGGGGAGGATCCTCACGGGATTCCAAATAATCTTATGCCATTTATTCAGCAAGTAGCGGTTGGCAGACGTCCTGCACTGACAGTTTTTGGAAATGATTATAAAACAGTTGATGGTACTGGGGTTCGGGATTACATTCATGTTGTTGATTTAGCTGATGGCCATATTGCTGCATTGCGTAAACTAGAAGAAGCTGACATAGGTTGTGACGTTTATAACTTGGGGACAGGAAAGGGAACATCAGTTTTGGAGATGGTTAGAGCTTTTGAGAAGGCATCTGGAAAGAAAATTCCACTTGTGAAGGCTGGCCGTAGACCTGGTGATGCTGAAATTGTTTATGCATCAACAAAAAAAGCTGAAAGAGAACTTAAGTGGAAGGCAAAATATGGAATTGATGAAATGTGCCGTGATCAATGGAATTGGGCTAGCAAAAACCCTTACGGCTATGGATCTCCTGATTCCACAAATTAA 1179 0.4275 MASRVGITNGTSSPLNSSRFLSPSKNSSFQTQNGSNSNSASLMTQNKTVLVTGGAGYIGSHTVLQLLLGGFKTVIVDNLDNSSEVAVRRVKELAAEFGKNLNFHKVDLRDKAALEQIFSSTKFDAVIHFAGMKAVGESVQKPLLYYNNNLIGTITLLEVMAAHGCKKLVFSSSATVYGWPKEVPCTEEFPLSAANPYGRTKLTIEEICRDVNRADPDWKIMLLRYFNPVGAHPSGYIGEDPHGIPNNLMPFIQQVAVGRRPALTVFGNDYKTVDGTGVRDYIHVVDLADGHIAALRKLEEADIGCDVYNLGTGKGTSVLEMVRAFEKASGKKIPLVKAGRRPGDAEIVYASTKKAERELKWKAKYGIDEMCRDQWNWASKNPYGYGSPDSTN* 393
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr5g0235 392 MobiDBLite consensus disorder prediction 1 40 - -
Mtr5g0235 392 Gene3D - 237 378 - -
Mtr5g0235 392 TIGRFAM galE: UDP-glucose 4-epimerase GalE 49 383 IPR005886 GO:0003978|GO:0006012
Mtr5g0235 392 Gene3D - 49 318 - -
Mtr5g0235 392 PANTHER UDP-GLUCOSE 4-EPIMERASE 5 46 389 - -
Mtr5g0235 392 PANTHER UDP-GLUCOSE 4-EPIMERASE 46 389 - -
Mtr5g0235 392 CDD UDP_G4E_1_SDR_e 48 377 IPR005886 GO:0003978|GO:0006012
Mtr5g0235 392 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 43 384 IPR036291 -
Mtr5g0235 392 Pfam GDP-mannose 4,6 dehydratase 50 373 IPR016040 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr5g0235 Mtr-Chr5 2143911 2147706 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr5g0235 38 362 Miscellaneous Gene Families AT4G00110 27.616 4.67e-23 98.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr5g0235 K01784 - gmx:100818509 653.669
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr5g0235 5 2143911 2147706 Mtr5g0235 5 2143911 2147706 ECH
Mtr5g0235 5 2143911 2147706 Mtr8g3558 8 46161567 46165915 PCT