Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr8g3546 ATGGCTGAAGATAAATCATTCATCGTTGAGGTTGAGAAAGCTAGAGATGCCAAAGATGGTAGGCCATCTATGGGTCCTGTTTATCGTAGCTGTTTCACTAAGGATGTCTCTCCTCCTCCCATTCAAGGTCTCGATACATGTTGGGATGTTTTCAGGACTGCTGTTGAGAAGTATCCAACAAATCCAATGCTGGGTCGCCGTGAAATAGTGAATGGGGATCCTGGCAAATTCAATTGGCAAACTTACAAAGAAGTGTATGACTTGGTGATCAAAATTGGGAAGTCCATTCGTGCTTGTGGTTATGGGGAAGGAGTAAAATGCGGCATTTATGGCGCCAATTGTCCGGAATGGATTATGAGCATGGAGGCCTGCAATGCTCATGGACTTTATTGTGTTCCTTTATATGATACCTTAGGTGCCGGGGCTGTGGAGTTTGTTATATCTCATGCAGAGGTCTCGATAGCATTTGTCGAAGAAAAGAAGATACCTGAGCTATTGAAGACATTTCCAAAGGCAGCAGAGTATCTCAAGACAATTGTGAGCTTTGGAAAAGTTTCTGAAGAACAAAAGCAAGAAGTTGAGAAGTTGGGGGTGAAAATATATTCATGGGATGAATTTTTAGAAGTGGGTCATGATAAGAATTTTGATCTTCCTGTAAAAAAGAAAAGCGACATATGTACAATAATGTACACAAGTGGAACAACCGGTGATCCCAAGGGAGTATTGATATCCAACGAGAACATTATTACACTTTTATCTGGGATGAAAAAGATATTAGGTAGTTGCAATGAACAAATGCATGAGAAAGATGTATACATATCATACCTTCCACTTGCACACATCTTTGACAGGATTATTGAAGAGGGAATCATATGGAGTGGTGCTGCATTAGGTTTCTGGCGAGGGGATATCAAATTGTTGATGGAAGACATTGCTGAGTTAAAACCAACTATTTTTTGTGCCGTTCCCCGTGTGCTTGATAGAGTGTACACAGGTTTGACAGAGAAGATTAATAATGGGGGTTTTGTGAAACAGACGATGTTCAATTGGGCCTATACATACAAGTTGCATAGCATGGAAAGAGGGCAAAAACATGAAACGGCAGCTCCATTAATGGACAAACTTGTATTCAGTAAGGTAAAACAAGCTTTAGGGGGTAATGTACGTATTGTTTTGTCTGGAGCTGCGCCTCTATCGAAACATGTTGAAGGTTTCCTGCGTGTTGTGACTTGTGCTCACATCTTACAAGGATATGGTCTTACTGAAACATGTGCTGGATCCTTTGTAACAATACCAAACGAAATAAATATGCTTGGTATGGTGGGACCTCCTTTACCATATATTGAAGTGTGTCTGGAGTCTGTACCTGAAATGGGATATGATGCACTTGCAACCAAACCAAGAGGAGAAATCTGTATTAAGGGTGGTACCGTTTTTGCTGGGTATCATAAACGTGAAGACCTCACCAAAGAAGTTATGATTGATGGATGGTTCCATACAGGAGATATTGGAGAGTGGCAACCTAATGGAAGCATGAAAATTATCGATCGAAAGAAGAATATATTTAAGCTTTCACAAGGCGAATATGTTGCTGTTGAAAACCTGGAGAATATTTATGTTCAAGTTAATGCTATTGAATCCATATGGATCTATGGAAACAGTTTTGAGCACTTCCTTGTTGCTGTTGTTAACCCAAGCAAGAAAGCAGTTGAAGATTGGGCTCAAGCAAATGATATGAAGATGGACTTTAATTCTCTATGTGAAGATTCAAAGGCGAAACATTACATACTTGGAGAGCTCTTAAAGATTGCGAAGGAAAAGAAGCTGAAAGGTTTTGAGTTTGTTAAAGCTGTTCATCTTGATCCAGTTCCATTTGACATGGAACGTGATCTTCTCACACCAACATTTAAGAAAAAGAGACCGCAGTTGCTTAAGTACTACCAGAATATCATTGACGAGATGTACAAGACGGCCAAATAA 1980 0.399 MAEDKSFIVEVEKARDAKDGRPSMGPVYRSCFTKDVSPPPIQGLDTCWDVFRTAVEKYPTNPMLGRREIVNGDPGKFNWQTYKEVYDLVIKIGKSIRACGYGEGVKCGIYGANCPEWIMSMEACNAHGLYCVPLYDTLGAGAVEFVISHAEVSIAFVEEKKIPELLKTFPKAAEYLKTIVSFGKVSEEQKQEVEKLGVKIYSWDEFLEVGHDKNFDLPVKKKSDICTIMYTSGTTGDPKGVLISNENIITLLSGMKKILGSCNEQMHEKDVYISYLPLAHIFDRIIEEGIIWSGAALGFWRGDIKLLMEDIAELKPTIFCAVPRVLDRVYTGLTEKINNGGFVKQTMFNWAYTYKLHSMERGQKHETAAPLMDKLVFSKVKQALGGNVRIVLSGAAPLSKHVEGFLRVVTCAHILQGYGLTETCAGSFVTIPNEINMLGMVGPPLPYIEVCLESVPEMGYDALATKPRGEICIKGGTVFAGYHKREDLTKEVMIDGWFHTGDIGEWQPNGSMKIIDRKKNIFKLSQGEYVAVENLENIYVQVNAIESIWIYGNSFEHFLVAVVNPSKKAVEDWAQANDMKMDFNSLCEDSKAKHYILGELLKIAKEKKLKGFEFVKAVHLDPVPFDMERDLLTPTFKKKRPQLLKYYQNIIDEMYKTAK* 660
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr8g3546 659 SUPERFAMILY Acetyl-CoA synthetase-like 44 657 - -
Mtr8g3546 659 CDD LC-FACS_euk 75 656 IPR045311 GO:0004467|GO:0006631
Mtr8g3546 659 Pfam AMP-binding enzyme 53 525 IPR000873 -
Mtr8g3546 659 PANTHER LONG CHAIN ACYL-COA SYNTHETASE 4-LIKE 7 657 - -
Mtr8g3546 659 PANTHER LONG-CHAIN-FATTY-ACID--COA LIGASE 7 657 - -
Mtr8g3546 659 ProSitePatterns Putative AMP-binding domain signature. 228 239 IPR020845 -
Mtr8g3546 659 Gene3D - 43 517 IPR042099 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr8g3546 Mtr-Chr8 46061420 46068194 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr8g3546 1 657 Acyl Lipid Metabolism Gene Families AT4G23850 70.167 0.0 1018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr8g3546 K01897 - gmx:100811306 1094.72
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr8g3546 8 46061420 46068194 Mtr8g3546 8 46061420 46068194 ECH
Mtr5g0243 5 2212186 2221430 Mtr8g3546 8 46061420 46068194 PCT