Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr8g3533 ATGGTGAAAATTGACATTGATCCTGATAAAGAAAAGCAGCTTCAGGGAGCTAAAACAGAAATTGAAGACAAAGTAAAAAGGATTTTGAAACTTATTAAAGATGACAAACTTGGCGAAAATGGTACCCGAGCAGAACTAACTGAATTGTTCAAACAATGCATCTGCTATCATGATCATCTGGAGGGGCACAATTTAGAGTTGAGGGACCAAATTTCAGAACTTGAAATGAAGTCCAAAGAAAGAGAAGAGGAACTATCTGCTATCATGAAGAAACTCGAAAATAAGGAGAATGCGTCATTACATGCTCAGAAAAATGAACTGGAAGAGCAGAAGATTGTTAAAAGTAATGAAGCTTCAACTCGGGCCGAAAGCAATACAAATGAGGTGAATGTATTGCGGCAGGAAGTGGAGTCTCTACAACACCAGAAATCTGACTTGGAAGTTCAGCTTGTGGAAAAAAGCCGAGAAAATTCTGAGTGTACGATTCAAATTCAAAGTCTGAAAGAGGAGGTTGAGAGAAAAACCCTGGAGCAAGAGAGACTTACGGAAGATAAAGAAAATTTAACGATGCATATAAGGAGTCTGGAATTGGAGATGGGCACTATAAAGAGCAAAAGTAGCGAAGATGAAGAGCAAATAAAGGCCAACATCCAAGTGATTAGTCATCTGACACAGCAGAAGTTGGAGCTACACGACAGAATAGCAAAATTAGAGAAAATATCAGATGAGAGAGAATCGGAGTTATTAGTTTTCCAAGATAAGCTTAATAAGGCAGAGGAAGAATGTTTGGTTGTAATATCTACCTGCAAGGAGCAAATTAAGATTCATAAAGATGATCAGCTTTCCATGTATAATGAGATGCAAAAATTAGGTCAGTCGATCGAAAAGCTGAAATTGGAGATGGATTACATAGACAACCAGAAGAGTGTAGTTGAAGAACAGTTAAGAGCCAAAGACTGTGAGTTGAACACTTTAAAGCAAAAAGTAAGTGAGAACGAAAAGCAAATAATTGCTTACTGTGATCACATCGCTAAACTGGCACAGGAGAAGTTGGAGCTGGCAGACAAAATAGATCATTCAGAGAAAAGATTAGCAACAAGAGAATTTGAGTTCTCTGCACTTCAGGATAAACTTTCCGAGGCAGAGGAAGAGTCGTCAGGAAAAATAGTTGCCTTCACAGCCCAAGTTGATAACCTGCAAAAGGACCTGCTTTCCTTGCAGAAAGCAAAAGAAGAGTTGGAGCACCACATCGAAAAAATCAGAGAAGAACATGCACAGGCCCTCACAAAGGTTGACAATGAAAATAATGAATTAGCCAACAAATACCTAGATCTTTTGAGAATATTGGAAGAACGGGATGAAGAATATAAACACGTTGATAGTTGGTATAGTGACTGTCAGGTCAAACTTAAACGTGCGGAGTGGAAGATGAGAAAAATGGCAGAAATGTTTCTTGAAGACATTGATTCAAAAGATCAGATGGTAGCTGATTTGGAACACCAAGTTGAAGAACTGAAAAGAGACCTGGAAGAGAAAGGAGATGAGGTCAGCTCTTTGCTTGAAAATGTCATGAATCTTGAGGTAAAGCTTTGCCTGTCAAACCAAGAGGAAGAGAGCTTTAGAAAGGTGGAAGAAAAGTTTCAGCAAGTTCAGAGAGCACTTGAAGACAGGATTGCTACTGACAATGAAGCTTTTCATGAAACTATCACAAGTATTAAAAAGTGTGTCAACAGTATGATATCTGGGATAGATACTATAAGCTCTAAATTTTCGGATGACTGCAATAATTATGAGAACCGCATCTCAAACATCTCATACGAGCTTCAGGTTGCAAAAGAATCTGTCAATGAGATGAGTAGGGAAAAGGGGCAGTTACAGACAGATAAAAACCATTTATTGGAGGAGTTGCAGGGTAAAAAGGAAGAGGGATCAACTCTGCAGAAAGAGGTTGAAAAGCTAGAGGCAAAGGCAAGAAAGGAGGAATCAGAGAAGATGAATGTGACAGCAACTGTTGATGAACTTAAGAAGACAGTTGAAGAGCTACAGAAGTTGATAAAAGAGAAAGAGGAAGGAATATTGGATTTGGGAGAGGAAAAGAGGGAGGCCATCAGGCAGCTCTGTTTGTTGATTGATTATCACCGCGAGTGTAATGTCTATCTCAAGGGAATCATCTCAAAGACTCAAAGGGGCCAGAGAGAAGCTTAA 2205 0.3909 MVKIDIDPDKEKQLQGAKTEIEDKVKRILKLIKDDKLGENGTRAELTELFKQCICYHDHLEGHNLELRDQISELEMKSKEREEELSAIMKKLENKENASLHAQKNELEEQKIVKSNEASTRAESNTNEVNVLRQEVESLQHQKSDLEVQLVEKSRENSECTIQIQSLKEEVERKTLEQERLTEDKENLTMHIRSLELEMGTIKSKSSEDEEQIKANIQVISHLTQQKLELHDRIAKLEKISDERESELLVFQDKLNKAEEECLVVISTCKEQIKIHKDDQLSMYNEMQKLGQSIEKLKLEMDYIDNQKSVVEEQLRAKDCELNTLKQKVSENEKQIIAYCDHIAKLAQEKLELADKIDHSEKRLATREFEFSALQDKLSEAEEESSGKIVAFTAQVDNLQKDLLSLQKAKEELEHHIEKIREEHAQALTKVDNENNELANKYLDLLRILEERDEEYKHVDSWYSDCQVKLKRAEWKMRKMAEMFLEDIDSKDQMVADLEHQVEELKRDLEEKGDEVSSLLENVMNLEVKLCLSNQEEESFRKVEEKFQQVQRALEDRIATDNEAFHETITSIKKCVNSMISGIDTISSKFSDDCNNYENRISNISYELQVAKESVNEMSREKGQLQTDKNHLLEELQGKKEEGSTLQKEVEKLEAKARKEESEKMNVTATVDELKKTVEELQKLIKEKEEGILDLGEEKREAIRQLCLLIDYHRECNVYLKGIISKTQRGQREA* 735
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr8g3533 734 Coils Coil 220 261 - -
Mtr8g3533 734 Coils Coil 389 441 - -
Mtr8g3533 734 Coils Coil 488 529 - -
Mtr8g3533 734 Coils Coil 343 384 - -
Mtr8g3533 734 PANTHER COP1-INTERACTIVE PROTEIN 1 260 732 - -
Mtr8g3533 734 PANTHER COP1-INTERACTIVE PROTEIN 1 5 51 - -
Mtr8g3533 734 PANTHER COP1-INTERACTIVE PROTEIN 1 59 273 - -
Mtr8g3533 734 Coils Coil 294 335 - -
Mtr8g3533 734 Coils Coil 608 698 - -
Mtr8g3533 734 Coils Coil 122 198 - -
Mtr8g3533 734 Coils Coil 57 110 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr8g3533 Mtr-Chr8 45948270 45950768 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr8g3533 - - mtr:MTR_8g099290 1253.43
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr5g0250 5 2295115 2297120 Mtr8g3533 8 45948270 45950768 PCT