Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr5g0250 ATGAAAGCACCTCCTCGTAGAGTAAAGAGAGTTTCTTCCCTCTCTTCCTCCAGTTCAGATGACACAGGATACTTTTCTTCTGATGACACAGAATTTGATCATTCAGATTTCAACAAAAGATTATCACAAAGGGAACGTTATTCTTCATTTGTCAATACTCTTGAAGCTCTCAAGACTCCAAAATCGACAGAAACAAATGAATTTGAAGCACATGAGGTGAAACAGCTACGCGCAAAGAATGCTGAACTTGAAAAAGCAGTGTCAGCGTTAAATGAAAAACTCAAGAACAATGAGGAACATGCAATGTCCAAAACTTTGGATTTGATGGCACGAATTAACAAGCTCGAACAAGAAGCTAAATCTCTTCGTAATAACAAAGGAAAAATTGAAGAAAGAATGAAACGTTCTAGAAATGAAGCATTGAATCAAAAGAAGGAATTCACTGATCAGATTAATGCCATGCAACAAAGCTTCGAGTCTGTACGCAACAACAACACAGAATTGGAAGCTCGTTTAGAAAATGAGAGGGAAAATGTTTCACAATATTTGATTCAGATAAAAAATTTGGAGGAGAATTTAGCTGAAACTGTTAGAGCTAAACAAAGTCTGCTAAAAGAGAAACAATGTTTCATTGAAAAGATAAAGGATTTGGAATCTCGATGCAGCAAAGAAAACGATTTGGAAGAACAATTAAGAAATGCAACGTGTGAGATAAACACGTTGCAGGAACAGAAAATCGAGTTAGAGTTACAAAATGAACAAAGCCATTTGGAGGAGAATTTAGCTGAAACTGTTGCAGCTAAACAAAGTCTGCTAAAAGAGAAACAATGTTTCATGGAAAGGATAAAGGATTTGGAATCTCGATGCAGCAAAGAAAACGATTTGGAAGAACAATTAAGTAATGCAATGTGTGAGATAAACACTTTGCAGAAACAGAAAATCGAGTTAGAGTTACAAAATGAACAAAGCCATTTGGAGGAGAATTTAGCTGAAACTGTTACAGCTAAACAAAGTCTGCTAAAAGAGAAACAATGTTTCATTGAAAGGATAAAGGATTTGGAATCTCGATGCAGCAAAGAAAACGATTTGGAAGAACAATTAAGAAATGCAATGTGTGAGATAAACACTTTGCAGAAACAGAAAATCGAGTTAGAGTTACAAAATGAAGAAAGCCAAAAGGAATTTTCGAAGTTGAATAAACAATTGACGGAAAGTAAAATGGATGAGTTAGCAGAAGGACATCGACAGAAAATGGAAGATAATATACATATATTGCATCGGAGGATCCACGTAGCAGAACAACTGAATAACGAAAACAAACACAGTTACAAATTGACAAAGCAAAAGTATGAGGAAGAGAACAAAATGCTTGGTGCAAAAATTGCTGATTATGAAGATGAAATTAAGACGCTAAAAGCGAAGGTGTGGAAATCAGAAGCTGATGTGAGCAAGCATGGAGGGGAGAAAATGAATTTGATGAAAACAGTGACACAGTTTGAAAGGAAAATGGGGAAATTGGAAAAGAAACTGAAACAGAAGGATGATGAACTGGCTAGCCTTGCAGAGAACAAGAAGGAAGCAATAAGGCAGCTTTGTTTTTTGGTTGACTTTCATCGTGATCGTTCTTTCTATCTAAAGGATTTGATATTAAAAATGAGGATAAAGAACATGAAGTGA 1677 0.3554 MKAPPRRVKRVSSLSSSSSDDTGYFSSDDTEFDHSDFNKRLSQRERYSSFVNTLEALKTPKSTETNEFEAHEVKQLRAKNAELEKAVSALNEKLKNNEEHAMSKTLDLMARINKLEQEAKSLRNNKGKIEERMKRSRNEALNQKKEFTDQINAMQQSFESVRNNNTELEARLENERENVSQYLIQIKNLEENLAETVRAKQSLLKEKQCFIEKIKDLESRCSKENDLEEQLRNATCEINTLQEQKIELELQNEQSHLEENLAETVAAKQSLLKEKQCFMERIKDLESRCSKENDLEEQLSNAMCEINTLQKQKIELELQNEQSHLEENLAETVTAKQSLLKEKQCFIERIKDLESRCSKENDLEEQLRNAMCEINTLQKQKIELELQNEESQKEFSKLNKQLTESKMDELAEGHRQKMEDNIHILHRRIHVAEQLNNENKHSYKLTKQKYEEENKMLGAKIADYEDEIKTLKAKVWKSEADVSKHGGEKMNLMKTVTQFERKMGKLEKKLKQKDDELASLAENKKEAIRQLCFLVDFHRDRSFYLKDLILKMRIKNMK* 559
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr5g0250 558 Coils Coil 268 331 - -
Mtr5g0250 558 MobiDBLite consensus disorder prediction 10 25 - -
Mtr5g0250 558 Coils Coil 447 481 - -
Mtr5g0250 558 Coils Coil 336 408 - -
Mtr5g0250 558 PANTHER MYOSIN HEAVY CHAIN-LIKE PROTEIN 471 555 - -
Mtr5g0250 558 PANTHER MYOSIN HEAVY CHAIN-LIKE PROTEIN 12 251 - -
Mtr5g0250 558 PANTHER MYOSIN HEAVY CHAIN-LIKE PROTEIN 395 472 - -
Mtr5g0250 558 MobiDBLite consensus disorder prediction 1 33 - -
Mtr5g0250 558 Coils Coil 489 530 - -
Mtr5g0250 558 Coils Coil 105 258 - -
Mtr5g0250 558 Coils Coil 66 100 - -
Mtr5g0250 558 PANTHER COP1-INTERACTIVE PROTEIN 1 12 251 - -
Mtr5g0250 558 PANTHER COP1-INTERACTIVE PROTEIN 1 395 472 - -
Mtr5g0250 558 PANTHER COP1-INTERACTIVE PROTEIN 1 471 555 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr5g0250 Mtr-Chr5 2295115 2297120 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr5g0250 - - cam:101488584 332.798
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr5g0250 5 2295115 2297120 Mtr5g0250 5 2295115 2297120 ECH
Mtr5g0250 5 2295115 2297120 Mtr8g3533 8 45948270 45950768 PCT