Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr8g3454 ATGACTACAATATTTAGACTCGCTTCCTCATCCTCTCCCTCTCTCCGCCACGACGCAACACCGCATAACTTCCATATTCGGAAAACCTCCATTTCCAACACCTTCTCTTTCTCTTCAAAGAATTCTTTGTCGTTCAAGAGAATTCTTACTTCCGGTGGTAGTCGTAGATTCATCGTTGCTGCTAGTCCTCCAACTGAAGATGCTGTTGTTGCTACTGAACCTCTTACAAAACAGGATCTCATTGATTATCTCGCTTCTGGCTGCAAAACCAAGGATAAATGGAGAATAGGTACTGAACATGAAAAGTTTGGTTTTGAGCTTGGAAGCTTGCGTCCTATGAAGTATGAGCAAATATCAGAATTGCTGAATGGCATTGCTGAAAGATTTGACTGGGATAAAGTAATGGAAGGTGATAACATTATTGGACTCAAACAGGGGAAGCAGAGCATATCATTAGAGCCAGGTGGTCAGTTTGAACTTAGTGGAGCCCCTCTGGAAACTCTGCATCAGACTTGTGCTGAAGTTAATTCGCACCTCTATCAAGTTAAAGCTGTTGCTGAGGAGATGGGAATTGGATTTTTGGGGATTGGTTTCCAGCCAAAGTGGGAACGCAAAGACATACCTATGATGCCAAAGGGAAGATATGAGATTATGAAAAAATACATGCCTAAAGTTGGTTCTCTTGGGCTTGACATGATGTTCAGGACATGCACTGTACAGATAGCAACAGCTCTTTTTGCAAATTCACCCTTCACAGATGGAAAGCCCAATGGGTTTGTTAGTATGAGAAGCCATATTTGGACTGATACCGATAAGGACCGCACAGGCATGCTGCCTTTTGTTTTTGATGACTCTTTCGGGTTTGAGCAGTACGTTGATTTTGCTCTTGATGTTCCAATGTATTTTGTCTATCGGAAAAAGAAATATATCGACTGTACTGGAATGACCTTCAGGGACTTCTTGGCAGGAAAGCTTCCTTGTATTCCTGGTGAATTACCGACCCTTAATGATTGGGAGAATCATTTGACCACTATATTTCCCGAGGTTAGGCTAAAGAGGTATTTGGAGATGAGAGGTGCTGATGGAGGGCCTTGGAGAAGGTTATGTGCTTTACCAGCATTTTGGGTAGGGATATTGTATGATGAGGTTTCTTTGCAACGTGTTTTGGATATGACAGCAGATTGGACTCTAGAAGAAAGAGAAATGCTAAGGAATAAGGTCACCGTAACTGGTCTAAAGACACCATTTCGAGATGGTTTGCTGAAGCATGTTGCTGAAGAGGTTCTAGAGCTGGCAAAGGATGGCTTGGAAAGAAGAGGCTTTAAGGAATCAGGATTTTTAAATGCGGTAGCTGAGGTGGTTAGAACAGGTGTCACTCCAGCTGAGAGGCTTTTGGAATTGTATCATGGAAAGTGGGAGCAATCTGTAGATCATGTATTTGACGAATTACTATACTAA 1458 0.4232 MTTIFRLASSSSPSLRHDATPHNFHIRKTSISNTFSFSSKNSLSFKRILTSGGSRRFIVAASPPTEDAVVATEPLTKQDLIDYLASGCKTKDKWRIGTEHEKFGFELGSLRPMKYEQISELLNGIAERFDWDKVMEGDNIIGLKQGKQSISLEPGGQFELSGAPLETLHQTCAEVNSHLYQVKAVAEEMGIGFLGIGFQPKWERKDIPMMPKGRYEIMKKYMPKVGSLGLDMMFRTCTVQIATALFANSPFTDGKPNGFVSMRSHIWTDTDKDRTGMLPFVFDDSFGFEQYVDFALDVPMYFVYRKKKYIDCTGMTFRDFLAGKLPCIPGELPTLNDWENHLTTIFPEVRLKRYLEMRGADGGPWRRLCALPAFWVGILYDEVSLQRVLDMTADWTLEEREMLRNKVTVTGLKTPFRDGLLKHVAEEVLELAKDGLERRGFKESGFLNAVAEVVRTGVTPAERLLELYHGKWEQSVDHVFDELLY* 486
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr8g3454 485 PANTHER GLUTAMATE--CYSTEINE LIGASE, CHLOROPLASTIC 241 485 IPR035434 GO:0004357|GO:0006750
Mtr8g3454 485 PANTHER GLUTAMATE--CYSTEINE LIGASE, CHLOROPLASTIC 19 241 IPR035434 GO:0004357|GO:0006750
Mtr8g3454 485 PANTHER GLUTAMATE--CYSTEINE LIGASE 19 241 - -
Mtr8g3454 485 PANTHER GLUTAMATE--CYSTEINE LIGASE 241 485 - -
Mtr8g3454 485 Gene3D - 60 242 - -
Mtr8g3454 485 Gene3D - 243 485 - -
Mtr8g3454 485 Pfam Glutamate-cysteine ligase family 2(GCS2) 242 395 IPR006336 GO:0004357|GO:0042398
Mtr8g3454 485 Pfam Glutamate-cysteine ligase family 2(GCS2) 128 241 IPR006336 GO:0004357|GO:0042398
Mtr8g3454 485 PIRSF GCL 62 242 IPR035434 GO:0004357|GO:0006750
Mtr8g3454 485 PIRSF GCL 241 485 IPR035434 GO:0004357|GO:0006750
Mtr8g3454 485 SUPERFAMILY Glutamine synthetase/guanido kinase 86 483 IPR014746 GO:0003824
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr8g3454 Mtr-Chr8 45053362 45060480 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr8g3454 K01919 - gmx:547545 825.854
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr8g3454 8 45053362 45060480 Mtr8g3454 8 45053362 45060480 ECH
Mtr5g0291 5 2704271 2708566 Mtr8g3454 8 45053362 45060480 PCT