Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr5g0291 ATGGGACTCCTTAGTATGAAAGGGACATTAGGATCATCATCCATGGTTTTAGGGAAAGTTGAGTCAAACCGAAGGGAAGAAGATGCATATTTTAAATTATCTTCCCTATATAGTGGTTCAGTCCATTATAAGTTTTTGTACAAAGATAGAGAGATATTAAAATGCAAAAAAGAGAGAAATGTTATTGTTGCAACTGGACCAGCCATAGAGGCTCCTGTTATTGCAACTGAGCCATTAACAAAAGATGATTTAATTGACTACATGGTATCTGGTTGCAAGCCTAAGGAAAAATGGAGAATAGGCACAGAACATGAGAAGTTTGGTTTTGAGTTTGATACTTTACGTCCAATCAAATACAAACAAATATCACCTTTACTTAATGGCATTGCTGAAAGGTTTCATTGGGATAAAATTATGGAAGGTGACAACGTCATAGGACTCAAAACTGGGAAGCAAAGCATATCATTGGAGCCTGGTGGACAAATTGAGCTTAGTGGTGCTCCTTTCAAAACATTGCATGAGACTTATGATGAGATTAACTTGCACCTCTATCAGGCTAAAACTGTTGCAGAGGAAATGAGAATTGGATTTATGGGATTAGGTTTTCAGCCTAAATGGAGACTAGGAGACATACCTAAAGTACCTAAGGTACGTTACAACATTATGCAAAATTACTTCAGTAAATTTGGGTTACTTGCTGTTCAATCATTGTTAATGACATGCTCAGTTCAGGTAAATTTGGACTTCAGTTCTGAAGCAGACATGGTCAAGAAAATGCGCGCCGGTCTAGCTTTGCAGCCGTTAGCAACAGCTTTATTTTCAAATTCACCTTTCAAGCAAGGAGCTCCAAACGGTTATGTCAGCTTTAGAAGCCATGTGAATGGTCAGGTTGATAAACGCCGTACTGGAATGCTCCCGTTTGTTTTTTATGATACTTTTGGGTTTGAGCAGTTTGTTGATTATGCTCTTGATGTACCAATGATATTTGTGTATCGAAAAAATAAATATATTCCATGTGGTGGCATGTCATTCCGGGACTTCATGGCCGGTAAACTCCCTGCCATTCGAGGTCAAGTGCCAACAATCAGTGATTGGGAGAATCACCTCACAACAATATTTCCTGAGGTCAGGCTAAAGAAGTACATGGAAATGAGAGGTGCTGATGGGGGGCCTTTGAATATGTTATGTGCTTTGCCTGCTTTTTGGGTAGGTCTACTATATGATGAGGTTTCACTACATAATGTTCTAGATATGATTGCGGACTGGACCGATGAAGACAAACAATATTTGAGGAATCAGGTTCCTTTTACCGGGTTAAAGACTCCATTTCAAGGTAGATTGTTGCAACATGTTGCTGAAGATGTGTTGAAGTGGGCAAAGGATGGCTTGGACAGAAGATGCTTAAATGAATCCATTTTCCTGGATCCATTGATTGAAGTGGTTGGAACAGGTATGACACCGGCTGAAAAGCTTTTGGAGATGTACAATAACAAGTGGGGAAGCAACATAGATTCTGTGTTTAGAGAGTGTTGCTACTGA 1539 0.3944 MGLLSMKGTLGSSSMVLGKVESNRREEDAYFKLSSLYSGSVHYKFLYKDREILKCKKERNVIVATGPAIEAPVIATEPLTKDDLIDYMVSGCKPKEKWRIGTEHEKFGFEFDTLRPIKYKQISPLLNGIAERFHWDKIMEGDNVIGLKTGKQSISLEPGGQIELSGAPFKTLHETYDEINLHLYQAKTVAEEMRIGFMGLGFQPKWRLGDIPKVPKVRYNIMQNYFSKFGLLAVQSLLMTCSVQVNLDFSSEADMVKKMRAGLALQPLATALFSNSPFKQGAPNGYVSFRSHVNGQVDKRRTGMLPFVFYDTFGFEQFVDYALDVPMIFVYRKNKYIPCGGMSFRDFMAGKLPAIRGQVPTISDWENHLTTIFPEVRLKKYMEMRGADGGPLNMLCALPAFWVGLLYDEVSLHNVLDMIADWTDEDKQYLRNQVPFTGLKTPFQGRLLQHVAEDVLKWAKDGLDRRCLNESIFLDPLIEVVGTGMTPAEKLLEMYNNKWGSNIDSVFRECCY* 513
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr5g0291 512 PANTHER GAMMA GLUTAMYL CYSTEINE SYNTHETASE 88 512 - -
Mtr5g0291 512 Gene3D - 64 512 - -
Mtr5g0291 512 TIGRFAM glu_cys_lig_pln: glutamate--cysteine ligase 78 512 IPR011556 GO:0004357|GO:0006750
Mtr5g0291 512 Pfam Glutamate-cysteine ligase family 2(GCS2) 132 422 IPR006336 GO:0004357|GO:0042398
Mtr5g0291 512 PIRSF GCL 65 512 IPR035434 GO:0004357|GO:0006750
Mtr5g0291 512 PANTHER GLUTAMATE--CYSTEINE LIGASE, CHLOROPLASTIC 88 512 IPR035434 GO:0004357|GO:0006750
Mtr5g0291 512 SUPERFAMILY Glutamine synthetase/guanido kinase 90 500 IPR014746 GO:0003824
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr5g0291 Mtr-Chr5 2704271 2708566 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr5g0291 K01919 - gmx:100775188 781.171
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr5g0291 5 2704271 2708566 Mtr8g3454 8 45053362 45060480 PCT