Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr8g3449 ATGAGCACCGAACCCAGTAACAGTAAGGATCCAAAATCGGTCTACGACTTCACTCTCAAGGATGGTATGGGAAATGATGTTGATCTCGCCACTTACAAGGGTAAAGTCCTCCTCATTGTTAATGTTGCTTCCAAATGTGGTATGACCAACTCAAATTATGTGGGGTTAAATCAACTATATGACAAGTACAAACTCAAAGGCCTTGAGATTCTGGCATTTCCAAGTAATCAATTTGGTGAGGAAGAACCTGGAACCAATGATCAAATATTGGATTTTGTTTGTACTCACTTCAAATCAGAATTCCCCATCTTTGATAAGATTGAAGTGAATGGGGACAATTCTGCTCCCTTGTATAAATTCTTAAAGTCGGGTAAATGGGGAATTTTTGGGGATGATATTCAGTGGAACTTTGCCAAGTTTCTAGTTGACAAGGATGGTCAAGTGGTGGATCGATATTATCCCACCACGTCTCCTCTTAGCCTTGAGCGAGATATCTGTAAACTACTTGGTGTTGAATGA 519 0.4008 MSTEPSNSKDPKSVYDFTLKDGMGNDVDLATYKGKVLLIVNVASKCGMTNSNYVGLNQLYDKYKLKGLEILAFPSNQFGEEEPGTNDQILDFVCTHFKSEFPIFDKIEVNGDNSAPLYKFLKSGKWGIFGDDIQWNFAKFLVDKDGQVVDRYYPTTSPLSLERDICKLLGVE* 173
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr8g3449 172 PIRSF Glutathion_perox 1 171 IPR000889 GO:0004602|GO:0006979
Mtr8g3449 172 PRINTS Glutathione peroxidase family signature 32 49 IPR000889 GO:0004602|GO:0006979
Mtr8g3449 172 PRINTS Glutathione peroxidase family signature 68 84 IPR000889 GO:0004602|GO:0006979
Mtr8g3449 172 PRINTS Glutathione peroxidase family signature 133 142 IPR000889 GO:0004602|GO:0006979
Mtr8g3449 172 ProSitePatterns Glutathione peroxidases signature 2. 71 78 IPR029760 -
Mtr8g3449 172 CDD GSH_Peroxidase 13 165 IPR000889 GO:0004602|GO:0006979
Mtr8g3449 172 SUPERFAMILY Thioredoxin-like 13 169 IPR036249 -
Mtr8g3449 172 PANTHER GLUTATHIONE PEROXIDASE 8-RELATED 8 171 - -
Mtr8g3449 172 ProSiteProfiles Glutathione peroxidase profile. 4 172 IPR000889 GO:0004602|GO:0006979
Mtr8g3449 172 ProSiteProfiles Thioredoxin domain profile. 8 170 IPR013766 -
Mtr8g3449 172 ProSitePatterns Glutathione peroxidases active site. 34 49 IPR029759 -
Mtr8g3449 172 PANTHER GLUTATHIONE PEROXIDASE 8 171 IPR000889 GO:0004602|GO:0006979
Mtr8g3449 172 Pfam Glutathione peroxidase 14 122 IPR000889 GO:0004602|GO:0006979
Mtr8g3449 172 Gene3D Glutaredoxin 5 171 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr8g3449 Mtr-Chr8 45023619 45025585 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr8g3449 K00432 - jre:109014460 294.664
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr8g3449 8 45023619 45025585 Mtr8g3449 8 45023619 45025585 ECH
Mtr5g0297 5 2764505 2766185 Mtr8g3449 8 45023619 45025585 PCT