Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr5g0297 ATGACCCCTGAAACAATCGGTGAACAAAAATCTGTGTTTGATTTTTATGTCAAGGATGCTAAGGGAGGTATTGCTAATCTCGCAACTTATAAGGGAAAAGTTCTGCTGATTGTCAATGTTGCTTCTCAATGCGGCTTAACCGACTCCAACTATGCTGAGTTGAATCAACTATATGACAAGTATAAAGACCAAGGCTTCGAGATTTTGGCATTTCCATGTAATCAATTTCGCGACCAAGAGCCCGAAACTAGTGATAAAATTGTGGAGTATGTTTGCACTCGCTTCGGATCAAAATTTCCCATCTTTGGTAAGATTAAAGTGAATGGGTTCCATTCTGCTCCTCTGTATAAATTCTTGAAGTCAGGGAAATTTGGAGTAATTTTTGGAGATGACATTCAGTGGAACTTTGCTAAGTTTTTGATTGATAAGGATGGCCAAGTTGCCGCTCGCTATTATCCTACCACTTCTCCTCTTAGCCTTGAGCATGATATTTGTCAGCTACTTTGTGACGGCAAGCTACTTTGTGTTGAGTAA 534 0.397 MTPETIGEQKSVFDFYVKDAKGGIANLATYKGKVLLIVNVASQCGLTDSNYAELNQLYDKYKDQGFEILAFPCNQFRDQEPETSDKIVEYVCTRFGSKFPIFGKIKVNGFHSAPLYKFLKSGKFGVIFGDDIQWNFAKFLIDKDGQVAARYYPTTSPLSLEHDICQLLCDGKLLCVE* 178
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr5g0297 177 ProSitePatterns Glutathione peroxidases signature 2. 69 76 IPR029760 -
Mtr5g0297 177 PANTHER GLUTATHIONE PEROXIDASE 8-RELATED 3 168 - -
Mtr5g0297 177 ProSitePatterns Glutathione peroxidases active site. 32 47 IPR029759 -
Mtr5g0297 177 PANTHER GLUTATHIONE PEROXIDASE 3 168 IPR000889 GO:0004602|GO:0006979
Mtr5g0297 177 ProSiteProfiles Thioredoxin domain profile. 6 169 IPR013766 -
Mtr5g0297 177 Pfam Glutathione peroxidase 12 120 IPR000889 GO:0004602|GO:0006979
Mtr5g0297 177 CDD GSH_Peroxidase 11 164 IPR000889 GO:0004602|GO:0006979
Mtr5g0297 177 Gene3D Glutaredoxin 4 170 - -
Mtr5g0297 177 PRINTS Glutathione peroxidase family signature 30 47 IPR000889 GO:0004602|GO:0006979
Mtr5g0297 177 PRINTS Glutathione peroxidase family signature 66 82 IPR000889 GO:0004602|GO:0006979
Mtr5g0297 177 PRINTS Glutathione peroxidase family signature 132 141 IPR000889 GO:0004602|GO:0006979
Mtr5g0297 177 PIRSF Glutathion_perox 1 171 IPR000889 GO:0004602|GO:0006979
Mtr5g0297 177 SUPERFAMILY Thioredoxin-like 11 168 IPR036249 -
Mtr5g0297 177 ProSiteProfiles Glutathione peroxidase profile. 2 174 IPR000889 GO:0004602|GO:0006979
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr5g0297 Mtr-Chr5 2764505 2766185 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr5g0297 K00432 - gmx:100527034 255.373
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr5g0297 5 2764505 2766185 Mtr5g0297 5 2764505 2766185 ECH
Mtr5g0297 5 2764505 2766185 Mtr8g3449 8 45023619 45025585 PCT