Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr8g3422 ATGGCCTTTTATAAACTGAGGCACCACTCCCACTTTCTACTCACAAAACAAAACAGAGTACACTTTCTTGTCAAAATGACTTCTCTCATAGAAACATTTCTATTTTCTCTCATTATTCTCTCTTTCACCTATACACAGGCAGCAACGTTCGACATCACAAACAATTGCCCTAACACTGTATGGGCCGCAGCCGTACCAGGTGGCGGTAAGCAACTAAACCGCGGCGAAAAATGGACCATTAACGTAGCTGCAGGAACCACATCGGCCCGTATTTGGGCCAGAACCAGTTGTAACTTTGACGGTTCAGGGAACGGTCGATGTCAAACCGGTGACTGCGGCGGTAAGCTGATCTGCCAAGCTTACGGTACAGCTCCAAATACACTAGCGGAATACTCTTTGAACCAATATATGAATTTGGACTTTTTTGATATATCTGTTATTGATGGATTCAACGTTCCTATGGAATTTAGTCCAACTTCTAATGGATGTACACGTGGCATAAGATGTACGGCTGATATCATCGGACAATGTCCTAATGAGCTTAAAACTCAAGGTGGTTGTAACAACGCATGTACCGTTTTTAAAACCGATAATTACTGTTGTAATTCTGGTAATTGTGGGCCCACTAATTATTCTCAATATTTCAAGAATAAGTGCCCAGATGCTTATAGTTACCCAAAGGATGATGCGACAAGTACATTCTCTTGCAAAGGTGGAACCAATTACAAGGTTGTCTTTTGCCCATGA 747 0.4203 MAFYKLRHHSHFLLTKQNRVHFLVKMTSLIETFLFSLIILSFTYTQAATFDITNNCPNTVWAAAVPGGGKQLNRGEKWTINVAAGTTSARIWARTSCNFDGSGNGRCQTGDCGGKLICQAYGTAPNTLAEYSLNQYMNLDFFDISVIDGFNVPMEFSPTSNGCTRGIRCTADIIGQCPNELKTQGGCNNACTVFKTDNYCCNSGNCGPTNYSQYFKNKCPDAYSYPKDDATSTFSCKGGTNYKVVFCP* 249
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr8g3422 248 PANTHER OS03G0233200 PROTEIN 29 248 IPR001938 -
Mtr8g3422 248 PIRSF PR5 3 248 IPR001938 -
Mtr8g3422 248 PANTHER THAUMATIN-LIKE PROTEIN 29 248 - -
Mtr8g3422 248 Pfam Thaumatin family 54 248 IPR001938 -
Mtr8g3422 248 SUPERFAMILY Osmotin, thaumatin-like protein 47 248 IPR037176 -
Mtr8g3422 248 Gene3D Thaumatin 48 248 IPR037176 -
Mtr8g3422 248 SMART tha2 50 248 IPR001938 -
Mtr8g3422 248 PRINTS Pathogenesis-related protein signature 49 61 IPR001938 -
Mtr8g3422 248 PRINTS Pathogenesis-related protein signature 68 77 IPR001938 -
Mtr8g3422 248 PRINTS Pathogenesis-related protein signature 90 101 IPR001938 -
Mtr8g3422 248 PRINTS Pathogenesis-related protein signature 103 132 IPR001938 -
Mtr8g3422 248 PRINTS Pathogenesis-related protein signature 140 156 IPR001938 -
Mtr8g3422 248 PRINTS Pathogenesis-related protein signature 238 247 IPR001938 -
Mtr8g3422 248 CDD TLP-P 50 248 - -
Mtr8g3422 248 ProSitePatterns Thaumatin family signature. 103 118 IPR017949 -
Mtr8g3422 248 ProSiteProfiles Thaumatin family profile. 47 248 IPR001938 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr8g3422 Mtr-Chr8 44802501 44803473 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr8g3422 29 248 Receptor kinase-like Gene Family AT5G38280 36.255 3.22e-42 150
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr8g3422 - - oeu:111380489 377.096
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr8g3422 8 44802501 44803473 Mtr8g3422 8 44802501 44803473 ECH
Mtr5g0313 5 2907201 2908279 Mtr8g3422 8 44802501 44803473 PCT