Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr5g0313 ATGGCCATCATCATGAAAACAAATCTCTCAATCTTCCTTCTCATAGCCATAACATCCATAGCTGCAGCACAAGCAGGAAGATTCAATATCACAAACAAATGCAACTACACCGTATGGGCTGCAGCCTTCCCCGGTGGCGGCATGAAACTCAACACCGGTGAATCATGGAACATGAACATAACCAACGGTACAAGTAACGCAAGAATCTGGGGTCGAACCAATTGCACTTTCGACAATTCAGGTCTCGGAAAGTGTCAAACCGGTGATTGCAATGGGACACTAGAGTGTAAAACAATTGGTACGCCACCAAACACAATCATGGAATTTGCTTTGAACATGTATAACGACCTTGATTTTTACGATGTTTCGCTTGTACAAGGTTTCAATATTCCAATTCAGTTAAAACCGTCTTTAAATTCTTGTGGTACCGTTAATTGTACCGCCGATATTAACGGAGAGTGTCCTACTCCACTTAAGGTACCAGGTGGATGTAACAATCCTTGTACTACGTTTGATACAACTGAATATTGTTGCAACTCTGATTCTGCTAGATCTGCAGCTACCAATGCCTCTGCCACATGTGGTCCAACAACTTATTCTAAGTTCTTTAAGGATAGGTGCCCTTATGCTTATAGTTACCCTAAAGATGATGCAACCAGCACATTCTCTTGTATGGGAGGAACAACTTATGATGTTGTCTTTTGTCCTTAA 711 0.4163 MAIIMKTNLSIFLLIAITSIAAAQAGRFNITNKCNYTVWAAAFPGGGMKLNTGESWNMNITNGTSNARIWGRTNCTFDNSGLGKCQTGDCNGTLECKTIGTPPNTIMEFALNMYNDLDFYDVSLVQGFNIPIQLKPSLNSCGTVNCTADINGECPTPLKVPGGCNNPCTTFDTTEYCCNSDSARSAATNASATCGPTTYSKFFKDRCPYAYSYPKDDATSTFSCMGGTTYDVVFCP* 237
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr5g0313 236 PANTHER PATHOGENESIS-RELATED THAUMATIN FAMILY PROTEIN 2 236 - -
Mtr5g0313 236 SUPERFAMILY Osmotin, thaumatin-like protein 27 236 IPR037176 -
Mtr5g0313 236 Gene3D Thaumatin 26 236 IPR037176 -
Mtr5g0313 236 PIRSF PR5 1 236 IPR001938 -
Mtr5g0313 236 PANTHER OS03G0233200 PROTEIN 2 236 IPR001938 -
Mtr5g0313 236 Pfam Thaumatin family 32 236 IPR001938 -
Mtr5g0313 236 ProSiteProfiles Thaumatin family profile. 25 236 IPR001938 -
Mtr5g0313 236 SMART tha2 28 236 IPR001938 -
Mtr5g0313 236 PRINTS Pathogenesis-related protein signature 27 39 IPR001938 -
Mtr5g0313 236 PRINTS Pathogenesis-related protein signature 46 55 IPR001938 -
Mtr5g0313 236 PRINTS Pathogenesis-related protein signature 68 79 IPR001938 -
Mtr5g0313 236 PRINTS Pathogenesis-related protein signature 81 110 IPR001938 -
Mtr5g0313 236 PRINTS Pathogenesis-related protein signature 118 134 IPR001938 -
Mtr5g0313 236 PRINTS Pathogenesis-related protein signature 226 235 IPR001938 -
Mtr5g0313 236 ProSitePatterns Thaumatin family signature. 81 96 IPR017949 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr5g0313 Mtr-Chr5 2907201 2908279 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr5g0313 11 236 Receptor kinase-like Gene Family AT5G38280 37.097 1.57e-45 159
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr5g0313 - - gmx:100037479 343.969
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr5g0313 5 2907201 2908279 Mtr5g0313 5 2907201 2908279 ECH
Mtr5g0313 5 2907201 2908279 Mtr8g3422 8 44802501 44803473 PCT