LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Mtr8g3412	ATGGGAGAGGAAGAAAAGAAACCAGAGGAAACCAAAGTAGAGGAGAAAAAACCAGAGCAACCACTGAAGAAAGAAGAAGAGAAGAAAGAAACTGAGAAACCACCGACAGAAGAAGAGAAAAAACCGGAGGAATCTAAGGAAGTTACACCGCGAGAAATTGTGCTTAAAGTCTTCATGCATTGTGAAGGTTGTGCTCGTAAAGTTCGTCGTTCACTCAAAGGTTTTCCAGGGGTTGAAGATGTGGTTACTGATTGCAAATCTCACAAGGTTATTGTTAAAGGAGAAAAAGCGGATCCATTGAAGGTTCTTGAAAGAGTTCAGAGGAAGAGTCATAGACAAGTTGAGCTTCTTTCTCCGATCCCAAAACCACCTTCAGAAGAAGAGAAACAAATTGATGAGAAAGAGAAACCTAAGCCAGAGGAAGAAAAGAAAGTTGAAGAGCCTAAGGTTATCATAGTGATTCTGAAAGTTCACATGCATTGTGAAGCTTGTTCACAAGAAATCAAGAGACGCATTGAGAAAATCAAAGGAGTTGAATCAGCTGAACCGGATCTGAAGAACTCACTAGTGACAGTGAAAGGAGTACTTGAAACTGATAAATTAGTAGAATATGTTTACAAGAGAACTGGAAAACAAGCTGTGATAGTGAAACAAGAGCCAGAGAAAAAAGAAGAATCAAAAGAAACCAAAGAAGAAGAGAAAAAAACTGAGGAAGGTGAAAAAGATCAGAAAGGGAGTGGTGAAGTCGAGGAAAAGAAAGAAGCTGCTGCTGCTGCAGAAGGAGATGGAAAACCAAGTGGTGATGGAGAAGGTGGTGCAGAAGAAGTTAAGGTGGTGGAGTTGAAGAGAAATGAATATTATTTTAATCCACCAAGGTATGGTACGGAGTTTTATGCATATGCTGGTCCAGCTTACCCTCCTCAAATTTTCAGTGATGAAAATCCAAATGCTTGTTCTATCATGTAA	966	0.3965	MGEEEKKPEETKVEEKKPEQPLKKEEEKKETEKPPTEEEKKPEESKEVTPREIVLKVFMHCEGCARKVRRSLKGFPGVEDVVTDCKSHKVIVKGEKADPLKVLERVQRKSHRQVELLSPIPKPPSEEEKQIDEKEKPKPEEEKKVEEPKVIIVILKVHMHCEACSQEIKRRIEKIKGVESAEPDLKNSLVTVKGVLETDKLVEYVYKRTGKQAVIVKQEPEKKEESKETKEEEKKTEEGEKDQKGSGEVEEKKEAAAAAEGDGKPSGDGEGGAEEVKVVELKRNEYYFNPPRYGTEFYAYAGPAYPPQIFSDENPNACSIM*	322

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Mtr8g3412	321	Pfam	Heavy-metal-associated domain	55	108	IPR006121	GO:0046872
	Mtr8g3412	321	Pfam	Heavy-metal-associated domain	156	205	IPR006121	GO:0046872
	Mtr8g3412	321	PANTHER	HEAVY METAL-ASSOCIATED ISOPRENYLATED PLANT PROTEIN 7	1	321	IPR044577	GO:0046872
	Mtr8g3412	321	MobiDBLite	consensus disorder prediction	112	143	-	-
	Mtr8g3412	321	SUPERFAMILY	HMA, heavy metal-associated domain	152	215	IPR036163	GO:0046872
	Mtr8g3412	321	MobiDBLite	consensus disorder prediction	218	259	-	-
	Mtr8g3412	321	CDD	HMA	59	115	IPR006121	GO:0046872
	Mtr8g3412	321	MobiDBLite	consensus disorder prediction	218	276	-	-
	Mtr8g3412	321	SUPERFAMILY	HMA, heavy metal-associated domain	53	109	IPR036163	GO:0046872
	Mtr8g3412	321	MobiDBLite	consensus disorder prediction	1	51	-	-
	Mtr8g3412	321	MobiDBLite	consensus disorder prediction	125	143	-	-
	Mtr8g3412	321	Gene3D	-	149	216	-	-
	Mtr8g3412	321	PANTHER	HEAVY METAL-ASSOCIATED ISOPRENYLATED PLANT PROTEIN 7	1	321	-	-
	Mtr8g3412	321	Gene3D	-	49	122	-	-
	Mtr8g3412	321	CDD	HMA	155	213	IPR006121	GO:0046872
	Mtr8g3412	321	ProSiteProfiles	Heavy-metal-associated domain profile.	59	115	IPR006121	GO:0046872
	Mtr8g3412	321	ProSiteProfiles	Heavy-metal-associated domain profile.	159	215	IPR006121	GO:0046872

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Mtr8g3412	Mtr-Chr8	44707527	44709357	Dispersed/Wgd

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Mtr8g3412	-		-	lang:109362245	319.316

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Mtr8g3412	8	44707527	44709357	Mtr3g3497	3	48838525	48840029	ECH
	Mtr8g3412	8	44707527	44709357	Mtr8g3412	8	44707527	44709357	ECH
	Mtr8g3412	8	44707527	44709357	Mtr3g3498	3	48842706	48844367	PCT