LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Mtr3g3498	ATGGGGGAGGAAGAGAAGAAAACAGAGGAACCGAAGAAGAAAGAAGAAACCAAGCCAGAGGAAACAAAAGATGAAGCTGCTGTTCCTGCGCCACCTCCGGCAGAGATTTTGCTGAAAGTTTTCATGCATTGTGAAAGCTGTGCTCGGAAAGTTCGTCGGTCGTTGAAAGATTTTCCAGGTGTTGAAGAAGTGATAACTGATTGCAAGTCTCATACGGTGGTTGTGAAAGGAGAGAAAGCGGAGCCATTGAAGGTTTTGGAAAGGGTTCAGAAGAAGAGTCATAGAAAGGTTGAGCTTCTTTCTCCGATCCCAATTGCTCCTGAGGAGGAAAAACCTGCTGAGGAAGAGAAGGCTGCACCTGAAGAGGAGAAGAAAGATGAGCCTCAGATTGTGATTACTGTCCTTAAAGTTCACATGCATTGTGAAGCTTGTGCAGAGGAAATCAAAAAACGGATACTTAAAATGAATGGAGTGGAATTGGTGGAAACTGATCTGAAGAACTCCGAGGTAAGTGTGAAGGGGGTGTATGATCCAGCAATGTTGGTTGAATATGTGTACAAGAGAATTGGGAAGCATGCAGTGATCATGAAGGAAGAGAAAGTGGATGTGGAAGCCAAAGCTGAGGAAGAGAAGAAAGAGGAGAAAGTTGAAGAAGTGGCAAAGAAGAAAGAAGAAGGAGAGGGTGAGGCCAAGCCACAAGAAGAGGAGAAAGAAGCAGAAGAAACAAATGTGGAAGAGGAGATGAAGAAATATCAATACTACTATAATCCATCCATGAATTTGTATGCATACCCAGAAATTGGATATCCTGCATACCCAGCTGCTTACTATCAAGCATACCCTCCACCACCGCCGCCGGCGCCACAAATGTTCAGTGATGAGAACCCAAATGCTTGCAGCGTCATGTGA	909	0.4455	MGEEEKKTEEPKKKEETKPEETKDEAAVPAPPPAEILLKVFMHCESCARKVRRSLKDFPGVEEVITDCKSHTVVVKGEKAEPLKVLERVQKKSHRKVELLSPIPIAPEEEKPAEEEKAAPEEEKKDEPQIVITVLKVHMHCEACAEEIKKRILKMNGVELVETDLKNSEVSVKGVYDPAMLVEYVYKRIGKHAVIMKEEKVDVEAKAEEEKKEEKVEEVAKKKEEGEGEAKPQEEEKEAEETNVEEEMKKYQYYYNPSMNLYAYPEIGYPAYPAAYYQAYPPPPPPAPQMFSDENPNACSVM*	303

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Mtr3g3498	302	MobiDBLite	consensus disorder prediction	1	25	-	-
	Mtr3g3498	302	Coils	Coil	193	229	-	-
	Mtr3g3498	302	CDD	HMA	42	98	IPR006121	GO:0046872
	Mtr3g3498	302	CDD	HMA	134	193	IPR006121	GO:0046872
	Mtr3g3498	302	ProSiteProfiles	Heavy-metal-associated domain profile.	42	98	IPR006121	GO:0046872
	Mtr3g3498	302	MobiDBLite	consensus disorder prediction	282	302	-	-
	Mtr3g3498	302	ProSiteProfiles	Heavy-metal-associated domain profile.	139	172	IPR006121	GO:0046872
	Mtr3g3498	302	MobiDBLite	consensus disorder prediction	1	31	-	-
	Mtr3g3498	302	PANTHER	HEAVY METAL-ASSOCIATED ISOPRENYLATED PLANT PROTEIN 7	3	302	-	-
	Mtr3g3498	302	PANTHER	HEAVY METAL-ASSOCIATED ISOPRENYLATED PLANT PROTEIN 7	3	302	IPR044577	GO:0046872
	Mtr3g3498	302	MobiDBLite	consensus disorder prediction	99	126	-	-
	Mtr3g3498	302	MobiDBLite	consensus disorder prediction	205	244	-	-
	Mtr3g3498	302	SUPERFAMILY	HMA, heavy metal-associated domain	37	92	IPR036163	GO:0046872
	Mtr3g3498	302	Gene3D	-	33	105	-	-
	Mtr3g3498	302	SUPERFAMILY	HMA, heavy metal-associated domain	131	195	IPR036163	GO:0046872
	Mtr3g3498	302	MobiDBLite	consensus disorder prediction	108	126	-	-
	Mtr3g3498	302	Gene3D	-	129	196	-	-
	Mtr3g3498	302	Pfam	Heavy-metal-associated domain	135	183	IPR006121	GO:0046872
	Mtr3g3498	302	Pfam	Heavy-metal-associated domain	39	92	IPR006121	GO:0046872

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Mtr3g3498	Mtr-Chr3	48842706	48844367	Dispersed/Tandem

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Mtr3g3498	-		-	cam:101507929	275.018

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Mtr8g3412	8	44707527	44709357	Mtr3g3498	3	48842706	48844367	PCT