Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr8g3400 ATGGCCATGACTCGTGAATCTTGGGCTTTTGTTTTCGGCATTATAGGCAACATCATTTCCTTTGCGGTGTTCCTCTCACCATTGCCAACTTTTTACGTAATCTTCAAGAAGAAATCTGCTGAAGGATTTCAGGCACTTCCTTATGTTGTGGCACTTTTCAGTGCAATGCTTTGGATCTACTATGCATTTGTCAAAAGAGAATCTGCTCTTCTTCTCATCACCATTAACACTTTTGGAATTGTTGTTGAATCAGCTTACATTATAATGTTCCTAATTTATGCCCCAAAGAAACAAAGGCTTTCAACCATAAAACTACTTCTCTTGCTGAATGTGTTTGGGTTTGGAGCCATGCTTCTATCAACTCTCTACCTTTCAAAGGGAGCAAAACGTCTTGCTATCATTGGATGGATTTGCCTTGTTTTCAACATAAGTGTATTTGCTGCACCTCTCTTCGTCATTAGCAAAGTCATAAGGTCAAGGAGCGTTGAATACATGCCATTTTTCTTGTCCTTCTTTTTAACTATCAATGCTGTTATGTGGTTCTTCTATGGCCTTCTCCTCAGGGATTACTATGTTGCTCTACCAAACACACTTGGATTTGTGTTCGGCATAATTCAGATGGTGGTGTATTTGATATATAGAAATGCTACACCAGTGGTAGAGGCACCAATGAAGGGTCAAGAGTTGAGTGGTGGTCATATAATTGATGTTGTGAAGATTGGAACAGATCCCAATCGTGCAGGTGGAGGTGCCGGTAGCAAAGTCTGA 768 0.4036 MAMTRESWAFVFGIIGNIISFAVFLSPLPTFYVIFKKKSAEGFQALPYVVALFSAMLWIYYAFVKRESALLLITINTFGIVVESAYIIMFLIYAPKKQRLSTIKLLLLLNVFGFGAMLLSTLYLSKGAKRLAIIGWICLVFNISVFAAPLFVISKVIRSRSVEYMPFFLSFFLTINAVMWFFYGLLLRDYYVALPNTLGFVFGIIQMVVYLIYRNATPVVEAPMKGQELSGGHIIDVVKIGTDPNRAGGGAGSKV* 256
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr8g3400 255 Pfam Sugar efflux transporter for intercellular exchange 133 216 IPR004316 GO:0016021
Mtr8g3400 255 Pfam Sugar efflux transporter for intercellular exchange 11 97 IPR004316 GO:0016021
Mtr8g3400 255 Gene3D - 10 99 - -
Mtr8g3400 255 PANTHER RAG1-ACTIVATING PROTEIN 1 4 242 - -
Mtr8g3400 255 Gene3D - 129 222 - -
Mtr8g3400 255 PANTHER BIDIRECTIONAL SUGAR TRANSPORTER SWEET 4 242 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr8g3400 Mtr-Chr8 44534094 44536422 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr8g3400 1 242 Miscellaneous Gene Families AT5G50800 57.613 1.59e-95 280
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr8g3400 K15382 - gmx:100805676 417.927
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr8g3400 8 44534094 44536422 Mtr8g3400 8 44534094 44536422 ECH
Mtr8g3400 8 44534094 44536422 Mtr3g3489 3 48767382 48772842 PCT