Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr3g3489 ATGGCCCTTTTTTACAGCGAGTATTGGGCTTTTGTTTTCGGCGTTATAGGCAATGTCATCTCTTGTATGACCTTCCTCGCTCCATTACCAACATTTTACCGAATCTACAAGAAGAAATCTACTGAAGGGTTTCAATCAGTTCCTTATGTTACTGCATTGTTGAGTGCAATGCTTTGGATCTATTATGCACATGTCAAAAACAAAGCTACACTCCTTCTCCTCACAATTAACATATATGGATTTGGAATAGAGGCAATTTACATTATAATCTTCCTACTTTATGCCTCAAATAAAGCAAGGCTTTCGACCATCAAGCTTCTTTTCTTAACTGTGTGTGGATATGGTACGATGGTTATTTTAACCACATACCTAACAAAGGGATCCAAACGTCTTTCTATTATTGGATGGATATGTATGGTTTTTAACATATGTGTATTTGCTTCTCCTCTCTTTATTTTGAAACAGGTAATAAAGACGAAAAGTGTAGCATTCATGCCGCTAAATTTGTCTTTCTTTTTGACCTTAAATGCTATTGTGTGGTTCTTCTATGGTCTTCTTATCGACGACTTTTATATCGCTATACCAAATACGCTAGGGTTTGTTTTCGGTATAGTTCAGATGGTGATTTATTTAATTTATAAAGATGCCATTCCACTAGAGTCAACGAAGTTACAGAAACCAAATGACCATGTTCTTAACATTTGTGAAGATGTGCCCAATGGTGCTCTCCAACCCGACCCGAATCAAGTAGTCAAAAGTGGTGCTCCGGCTGTCGCAGTGATCGGTGATGAGGATCCAAATAACGGAAAATGA 813 0.3764 MALFYSEYWAFVFGVIGNVISCMTFLAPLPTFYRIYKKKSTEGFQSVPYVTALLSAMLWIYYAHVKNKATLLLLTINIYGFGIEAIYIIIFLLYASNKARLSTIKLLFLTVCGYGTMVILTTYLTKGSKRLSIIGWICMVFNICVFASPLFILKQVIKTKSVAFMPLNLSFFLTLNAIVWFFYGLLIDDFYIAIPNTLGFVFGIVQMVIYLIYKDAIPLESTKLQKPNDHVLNICEDVPNGALQPDPNQVVKSGAPAVAVIGDEDPNNGK* 271
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr3g3489 270 Pfam Sugar efflux transporter for intercellular exchange 12 98 IPR004316 GO:0016021
Mtr3g3489 270 Pfam Sugar efflux transporter for intercellular exchange 133 214 IPR004316 GO:0016021
Mtr3g3489 270 PANTHER RAG1-ACTIVATING PROTEIN 1 5 254 - -
Mtr3g3489 270 Gene3D - 11 100 - -
Mtr3g3489 270 Gene3D - 128 216 - -
Mtr3g3489 270 PANTHER BIDIRECTIONAL SUGAR TRANSPORTER SWEET 5 254 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr3g3489 Mtr-Chr3 48767382 48772842 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr3g3489 9 236 Miscellaneous Gene Families AT5G50800 52.586 8.51e-84 251
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr3g3489 K15382 - gmx:100794434 326.25
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr3g3489 3 48767382 48772842 Mtr3g3489 3 48767382 48772842 ECH
Mtr8g3400 8 44534094 44536422 Mtr3g3489 3 48767382 48772842 PCT