Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr8g3399 ATGGTTCACAGAGACAATACTGCGATTTTTGTAGTTGGTATTCTAGGTAACATTGCCTCCTTCTTCTGCTTTATAGCCCCCGTGTCAATATTTTATCAAGTTTGTAAGAAGAAAACAACAGGAGGTTTCCAATCTGCTCCATATGTGGCTGCACTCTTCAGTGCAATGCTTTGGATATTTTATGCTTACATAAAAACGGGTGAAATGCTTATCATCACCATCAATGCATTTGGTTGTGTGATAGAAACAATTTACCTAGTCATCTATACCACTTACTGCTCCAAGAAAGCTAGGATCTTCACATTGAAGCTGATTGGGTTGTTTAATTTGGGAGGAATTTGCTTGGTGATTATTCTAACACATGTTCTAGCAAAAGAACGAACAGAACGTATCGAACTTCTTGGATGGATTTGTGTTGTCCTCTCAACTAGTGTTTTTGCAGCACCTTTAAGCGTTATGAGAGTGGTTATTCGCACCAAAAGTGTTGAGTTTATGCCTTTCACTCTTTCACTCCTCCTCACAACAAGTGCAATTATATGGCTGTGCTATGGTATTCTCCTCAAAGATATATTTGTTACGCTTCCGAACTTTGTGGGTATCACATTTGGAACAATTCAGATGGTGTTGTATGCAATATACAGAAAAAACAAACCTGTAAATGATCAAAAGCTACCAGAACACAAAGATGATATGAATGAGAATCAGCTGCAAGTAGTAGTGATCCCTCTTCAAAATGTTGTTGATATCGAAACTACAATGGAGAATAAAGAAGAGAAGAAACAGGAAGAAACAAAACCAAGTGAAGGAAATCAAGTACAACAACAAAAGGAAGGTTGA 837 0.3751 MVHRDNTAIFVVGILGNIASFFCFIAPVSIFYQVCKKKTTGGFQSAPYVAALFSAMLWIFYAYIKTGEMLIITINAFGCVIETIYLVIYTTYCSKKARIFTLKLIGLFNLGGICLVIILTHVLAKERTERIELLGWICVVLSTSVFAAPLSVMRVVIRTKSVEFMPFTLSLLLTTSAIIWLCYGILLKDIFVTLPNFVGITFGTIQMVLYAIYRKNKPVNDQKLPEHKDDMNENQLQVVVIPLQNVVDIETTMENKEEKKQEETKPSEGNQVQQQKEG* 279
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr8g3399 278 Pfam Sugar efflux transporter for intercellular exchange 133 217 IPR004316 GO:0016021
Mtr8g3399 278 Pfam Sugar efflux transporter for intercellular exchange 11 96 IPR004316 GO:0016021
Mtr8g3399 278 MobiDBLite consensus disorder prediction 252 278 - -
Mtr8g3399 278 PANTHER BIDIRECTIONAL SUGAR TRANSPORTER SWEET 5 277 - -
Mtr8g3399 278 PANTHER RAG1-ACTIVATING PROTEIN 1 5 277 - -
Mtr8g3399 278 MobiDBLite consensus disorder prediction 252 266 - -
Mtr8g3399 278 Gene3D - 127 218 - -
Mtr8g3399 278 Gene3D - 7 98 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr8g3399 Mtr-Chr8 44513216 44515660 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr8g3399 1 277 Miscellaneous Gene Families AT5G50800 49.158 1.18e-87 261
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr8g3399 K15382 - gmx:100801430 361.688
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr8g3399 8 44513216 44515660 Mtr3g3488 3 48762775 48764685 ECH
Mtr8g3399 8 44513216 44515660 Mtr8g3399 8 44513216 44515660 ECH
Mtr8g3399 8 44513216 44515660 Mtr3g3488 3 48762775 48764685 PCT