Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr3g3488 ATGTCGTCCCACCACAGTCATCTATCTTTTGCCTTTGGAGTTCTAGGCAACATTTCATCCTTTGTGTGCTTTCTAGCACCACTACCAACATTTTATCGAATTTGTAAGAAGAAATCAACAGAAGGTTTCCAATCAATTCCATATGTGGCTGCACTATTTAGTGCAATGCTTTGGATGTTTTATGCCTATACCAAGAAGGGTGAAACTCTTCTTATCACCATCAATGCATTCGGTTGTGTGATAGAGACAATTTACCTCGCAGTTTTTGTTACTTACTGCCCCAAGAAAGTTAGGATGTCAACATTGAGGATGATTGTGTTGATGAACTTTGTGGGATTTGGCACGATTGTCTTGTTAACTCACTTCCTAGCAAAACAAGAAGAAGGACGTATCAAGCTTCTTGGATGGATTTGTGTAGTTTTTGCTACTAGTGTTTTTGCTGCCCCTTTAAGCATTATCAGAGTTGTTATTCGCACCAAAAGTGTAGAGTTCCTTCCTTTTCCACTTTCAGTTCTCCTCCTCATAAGCGCGGTTATGTGGCTGTTGTATGGTCTTTCTCTCCGAGATATCTATGTTACTCTCCCGAACGTTGTGGGGTTAACATTTGGAATAGTTCAGATCACACTCTATGCAATGTACAGAAACAGCAAACCCGTAATTGATGAGAAGCTACCAGAACATAAAGGAGACATTGTCGACAAAGAAATTGAAAACGTAGTAGTTCCAAGTAAAACAACAAATGATGAGAAGAAACTAGAAGTGAGTGTTGTTGATATGGTGATTGTGGAGAAAAAGGAAGAGAAACAAGATGAAGAACATGATGAGAAAGAGAAGAAACAAGACCAAGTAACTCAGGACAAAACAAAGGTTAAGAATGAAAATGACAACATTAATATCAACAAAACAGAGGAGAAAGATAGTGGTTGTGAAGTTTAA 936 0.3835 MSSHHSHLSFAFGVLGNISSFVCFLAPLPTFYRICKKKSTEGFQSIPYVAALFSAMLWMFYAYTKKGETLLITINAFGCVIETIYLAVFVTYCPKKVRMSTLRMIVLMNFVGFGTIVLLTHFLAKQEEGRIKLLGWICVVFATSVFAAPLSIIRVVIRTKSVEFLPFPLSVLLLISAVMWLLYGLSLRDIYVTLPNVVGLTFGIVQITLYAMYRNSKPVIDEKLPEHKGDIVDKEIENVVVPSKTTNDEKKLEVSVVDMVIVEKKEEKQDEEHDEKEKKQDQVTQDKTKVKNENDNININKTEEKDSGCEV* 312
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr3g3488 311 Gene3D - 11 96 - -
Mtr3g3488 311 PANTHER BIDIRECTIONAL SUGAR TRANSPORTER SWEET 7 284 - -
Mtr3g3488 311 Coils Coil 261 293 - -
Mtr3g3488 311 PANTHER RAG1-ACTIVATING PROTEIN 1 7 284 - -
Mtr3g3488 311 Gene3D - 129 224 - -
Mtr3g3488 311 Pfam Sugar efflux transporter for intercellular exchange 133 217 IPR004316 GO:0016021
Mtr3g3488 311 Pfam Sugar efflux transporter for intercellular exchange 11 96 IPR004316 GO:0016021
Mtr3g3488 311 MobiDBLite consensus disorder prediction 265 311 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr3g3488 Mtr-Chr3 48762775 48764685 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr3g3488 1 307 Miscellaneous Gene Families AT5G50800 50.325 7.68e-95 281
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr3g3488 K15382 - gmx:100810426 439.499
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr8g3399 8 44513216 44515660 Mtr3g3488 3 48762775 48764685 ECH
Mtr3g3488 3 48762775 48764685 Mtr3g3488 3 48762775 48764685 ECH
Mtr8g3399 8 44513216 44515660 Mtr3g3488 3 48762775 48764685 PCT