Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr8g3394 ATGGCGGAAATTCAACCGGCGGAGGGGCAGATAAATGGCGGCGGAACCCTAATTTTGAACTCAACTGAACCAATCGGAACGAAGCGACAGAGAAGACCAAGTGTCCGATTAGGTGATATTGGCGTCGACCCACCTTACGATTCTCACGCCCGACGCAACAATAAGAGCTGGAAACTCTCCTTCGATCATCAACGCAAGGAAAAAGATTCAATTGCTTCAGGTAAACCTTCAAAGATTCGACCTTTAACTAATTTGAGTTCGGTCGGTGAATTCAATGAAACCCTAGACGGTGAAGGGAATATTGATAGTACTGTTGCAATTGGTGGCTGGAAGGTTAAAGAATCAAAGAAGAGAGGTTCTGTTGCTACTAAGAGAGTTAGATCGAATTGGGTTTCTAGAATTGATGAAACCGGTGGTGGTGTTGTTGAGGAAAAATATAGTGGTGCTGAAGATGTGGATGATGGGTATAGAGAATTTGATGTGGAAAATTCGGAAAGTCCTTTGAAAGAACAAAGTCCTATTCATTCAATGGAGAACTTAGGGATTGATGGGCATAGAAGGAGTTTTAAGAGTAGGGATCATAATGATGGGATTGAGTTATCTGGGCCATCTGAAAATGGTGATAGGAATGACAATGTTGGGAGGATTAGGTTTGGTGAAGATGGGATTAGGATTTGGCTTAATGGGTTGGGATTAGGTCGTTATGCGCCCGTGTTTGAAGTGCATGAAGTTGATGATGAAGTTTTGCCGATGTTGACGCTAGAGGATCTCAAAGATATGGGAATTAATGCTGTTGGATCGAGAAGAAAACTGTACTGCGCTATTCAGAAGCTTGGTAAGGGCTTCTCTTGA 852 0.4284 MAEIQPAEGQINGGGTLILNSTEPIGTKRQRRPSVRLGDIGVDPPYDSHARRNNKSWKLSFDHQRKEKDSIASGKPSKIRPLTNLSSVGEFNETLDGEGNIDSTVAIGGWKVKESKKRGSVATKRVRSNWVSRIDETGGGVVEEKYSGAEDVDDGYREFDVENSESPLKEQSPIHSMENLGIDGHRRSFKSRDHNDGIELSGPSENGDRNDNVGRIRFGEDGIRIWLNGLGLGRYAPVFEVHEVDDEVLPMLTLEDLKDMGINAVGSRRKLYCAIQKLGKGFS* 284
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr8g3394 283 MobiDBLite consensus disorder prediction 45 74 - -
Mtr8g3394 283 PANTHER PROTEIN BICAUDAL C HOMOLOG 1-A-LIKE 21 283 - -
Mtr8g3394 283 CDD SAM_superfamily 226 277 - -
Mtr8g3394 283 SUPERFAMILY SAM/Pointed domain 221 278 IPR013761 -
Mtr8g3394 283 SMART SAM_4 215 281 IPR001660 GO:0005515
Mtr8g3394 283 Pfam SAM domain (Sterile alpha motif) 225 278 IPR001660 GO:0005515
Mtr8g3394 283 PANTHER SCP160 21 283 - -
Mtr8g3394 283 MobiDBLite consensus disorder prediction 193 212 - -
Mtr8g3394 283 ProSiteProfiles SAM domain profile. 218 281 IPR001660 GO:0005515
Mtr8g3394 283 MobiDBLite consensus disorder prediction 14 28 - -
Mtr8g3394 283 MobiDBLite consensus disorder prediction 1 82 - -
Mtr8g3394 283 Gene3D - 218 278 IPR013761 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr8g3394 Mtr-Chr8 44470370 44472032 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr8g3394 - - aprc:113856178 413.69
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr8g3394 8 44470370 44472032 Mtr3g3478 3 48654118 48655098 ECH
Mtr8g3394 8 44470370 44472032 Mtr8g3394 8 44470370 44472032 ECH