Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr3g3478 ATGGAAGAGGTTCCGCCACCGGAGGTCCAGATAAACGGCGGAGCAACAACTGCAGTAACACTACCCCCTTCCGAACCTCATGGATCGAAGCGGCAACGCCGACCCAGCGTCCGATTAGGCGATATCGGAGACCAACCCTCCGATTCCCACCCTCGCCGTAGTTCAAAATCATGGCGATTTGGCTTGGGCAACGTCTCAGGTAAACCCTCAAAGACTCGTCCTTTGACCAATTTGACTTCTGTTTCCGATTTCGACGAAGACGTAGAAACGAACACCGACGGTGTAATCATTGGTAGCTGGAAAGTGAAAAAGGGTTCCAAAAGACCAAGATCGAATTGGGTATCTTCGCGAATCGAAGAAGGTGAAGATGTTGATAATGATAATGAAGATGATTTGTATCGAGATTTTGAAGGTGATAATTCGGGTAGTAGAATTCGTTCTTCAGAGAATTTAGGTGATTTTGATGCTAGGAATGAAGATGGTGGAAGAGGAAGTTGTGGTGAAGATGGTGTTAGAATTTGGCTTAATGGATTAGGTTTAGGTCGATATGCACCTGTTTTTCAAATTCATGAAGTTGATGATGAAGTTTTGCCTTTGTTAACACTTGAAGATCTTAAAGATATGGGTATTAATGCTGTTGGTTCTAGAAGGAAATTGTATTGTGCTATTCAGAAGCTTGGGAAGGGGTTCTCCTAA 696 0.4382 MEEVPPPEVQINGGATTAVTLPPSEPHGSKRQRRPSVRLGDIGDQPSDSHPRRSSKSWRFGLGNVSGKPSKTRPLTNLTSVSDFDEDVETNTDGVIIGSWKVKKGSKRPRSNWVSSRIEEGEDVDNDNEDDLYRDFEGDNSGSRIRSSENLGDFDARNEDGGRGSCGEDGVRIWLNGLGLGRYAPVFQIHEVDDEVLPLLTLEDLKDMGINAVGSRRKLYCAIQKLGKGFS* 232
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr3g3478 231 SUPERFAMILY SAM/Pointed domain 168 226 IPR013761 -
Mtr3g3478 231 MobiDBLite consensus disorder prediction 1 78 - -
Mtr3g3478 231 CDD SAM_superfamily 171 225 - -
Mtr3g3478 231 PANTHER SCP160 165 231 - -
Mtr3g3478 231 PANTHER SCP160 5 158 - -
Mtr3g3478 231 PANTHER - 5 158 - -
Mtr3g3478 231 PANTHER - 165 231 - -
Mtr3g3478 231 SMART SAM_4 163 229 IPR001660 GO:0005515
Mtr3g3478 231 Pfam SAM domain (Sterile alpha motif) 170 226 IPR001660 GO:0005515
Mtr3g3478 231 Gene3D - 166 226 IPR013761 -
Mtr3g3478 231 ProSiteProfiles SAM domain profile. 169 229 IPR001660 GO:0005515
Mtr3g3478 231 MobiDBLite consensus disorder prediction 137 163 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr3g3478 Mtr-Chr3 48654118 48655098 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr3g3478 - - mtr:MTR_3g498865 466.463
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr8g3394 8 44470370 44472032 Mtr3g3478 3 48654118 48655098 ECH
Mtr3g3478 3 48654118 48655098 Mtr3g3478 3 48654118 48655098 ECH