Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr8g3376 ATGGAAGCAGTGAAGGGTTGTCATAAGGAATTAGAAGCAAAAGCACAAGTAGTTGCAAATGATGTTGTCACAGAAACTGAACTAACCAAAATCCGTCTTGTGAGAGCCTTTGTTGAAACACAAGATCCATCTTCTAAGGAGGAAGATGATTTGATGATTAGAAGATTCTTACGAGCTCGTGATTTAGATGTGGAAAAGGCTTCAGCAATGTTCCTAAAGTACTTGAAATGGAGACATTCATTTGTTCCAAATGGTTCCATATCTCTATCACAGGTTCATAGTCAAATTGCAGACGACAAGGCCTTCGCCCAAGGACGGGACAAGATTGGTCGACCTATACTTATTGCCTTCGGTGGAAAACATTATCAAAAGAAAGATGGTCTAGATGAATTCAAACGTTTTGTAGTTTATATTCTTGATAAACTATGTGCAAGCATGCCAGCTGGACAAGAGAAATTCGTTGGTATAGCAGAACTCAAGGGATGGGGTTACTCAAATAGTGATGTGCGTGGATACATTGGTGCCCTCTCCATTTTGCAGGATTACTACCCTGAAAGATTGGGAAAGTTGTTAATTCTCCACGCACCATACATTTTTATGAAAGTGTGGAAAATAATTTACCCGTTCATTGACAACAAAACCAAGAAGAAGATAGTATTTGTGGAGAACAATAAGCTAAAATCAACACTTCTAGAAGACATAGATGAAAGTCAACTCCCTGAGATATATGGTGGCAAACTGCAATTAGTCCCCATCCAGAATATCTAA 768 0.388 MEAVKGCHKELEAKAQVVANDVVTETELTKIRLVRAFVETQDPSSKEEDDLMIRRFLRARDLDVEKASAMFLKYLKWRHSFVPNGSISLSQVHSQIADDKAFAQGRDKIGRPILIAFGGKHYQKKDGLDEFKRFVVYILDKLCASMPAGQEKFVGIAELKGWGYSNSDVRGYIGALSILQDYYPERLGKLLILHAPYIFMKVWKIIYPFIDNKTKKKIVFVENNKLKSTLLEDIDESQLPEIYGGKLQLVPIQNI* 256
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr8g3376 255 CDD SEC14 105 246 IPR001251 -
Mtr8g3376 255 SMART CRAL_TRIO_N_2 49 74 IPR011074 -
Mtr8g3376 255 Gene3D - 2 253 IPR036865 -
Mtr8g3376 255 SUPERFAMILY CRAL/TRIO domain 99 248 IPR036865 -
Mtr8g3376 255 SMART sec14_4 95 248 IPR001251 -
Mtr8g3376 255 SUPERFAMILY CRAL/TRIO N-terminal domain 23 84 IPR036273 -
Mtr8g3376 255 PANTHER OS03G0850700 PROTEIN 7 254 - -
Mtr8g3376 255 Pfam CRAL/TRIO domain 100 245 IPR001251 -
Mtr8g3376 255 ProSiteProfiles CRAL-TRIO lipid binding domain profile. 105 251 IPR001251 -
Mtr8g3376 255 PANTHER POLYPHOSPHOINOSITIDE-BINDING PROTEIN 7 254 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr8g3376 Mtr-Chr8 44244090 44250446 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr8g3376 55 240 Acyl Lipid Metabolism Gene Families AT5G47730 27.228 3.39e-11 60.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr8g3376 - - mtr:MTR_8g096170 509.22
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr8g3376 8 44244090 44250446 Mtr3g3461 3 48432712 48434978 ECH
Mtr8g3376 8 44244090 44250446 Mtr8g3376 8 44244090 44250446 ECH
Mtr8g3376 8 44244090 44250446 Mtr3g3461 3 48432712 48434978 PCT