Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr3g3461 ATGGAAACAGTGAACCCTGAGCCTGGGAGGAATTCAGCATTGGATTCAAAACATGAATTGGCTAAAGAAGAAACCAAAGGGAAAATTCTTGTTCAAGATGATGGAGCTTTGAATGATAGCACAGAAGCAGAACTCACCAAAATCAACCTCATGAGAACTCTTGTTGAAAGCCGGGACCCTTCTTCTAAGGAAGTAGATGATTTGATGATTAGAAGATTCTTGAGAGCTCGTGATTTAGATGTAGATAAGGCTTCAGCTATGTTCCTAAAGTACATGAAATGGAGAAAATCATTTGTTCCAAGTGGTTCTGTATCCCCTTCAGAGATAGCTGATGATCTTGCACAGGAAAAGATCTATGTTCAAGGATTGGATAAGAAGGGTCGACCTATAATTGTTGCCTTTGCTGCCAAGCATTTTCAAAACAAAAATGGTTTGGATGCATTCAAACGGTATGTAGTTTTCGCTCTTGAGAAACTAATTTCAAGGATGCCACCAGGGGAAGAAAAGTTTGTATCTATTGCAGACATTAAGGGATGGGGTTACGCAAACAGCGACATACGCGGTTACCTCGGTGCTCTAACCATTCTACAAGATTACTATCCAGAGAGATTGGGAAAGTTGTTCATAGTACATGCACCTTACATGTTTATGAAAGTATGGAAAATTATTTACCCTTTCATTGATGACAATACCAAGAAGAAGATAGTATTTGTTGAGAACAAGAAGCTGAAAGCAACATTGCTTGAAGAGATTGATGAGAGTCAGCTCCCAGAGATATATGGAGGCAAACTTCCATTAGTTCCAATACAAGATTCTTGA 819 0.3907 METVNPEPGRNSALDSKHELAKEETKGKILVQDDGALNDSTEAELTKINLMRTLVESRDPSSKEVDDLMIRRFLRARDLDVDKASAMFLKYMKWRKSFVPSGSVSPSEIADDLAQEKIYVQGLDKKGRPIIVAFAAKHFQNKNGLDAFKRYVVFALEKLISRMPPGEEKFVSIADIKGWGYANSDIRGYLGALTILQDYYPERLGKLFIVHAPYMFMKVWKIIYPFIDDNTKKKIVFVENKKLKATLLEEIDESQLPEIYGGKLPLVPIQDS* 273
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr3g3461 272 ProSiteProfiles CRAL-TRIO lipid binding domain profile. 106 268 IPR001251 -
Mtr3g3461 272 MobiDBLite consensus disorder prediction 1 25 - -
Mtr3g3461 272 Pfam CRAL/TRIO domain 116 262 IPR001251 -
Mtr3g3461 272 SMART CRAL_TRIO_N_2 66 91 IPR011074 -
Mtr3g3461 272 SMART sec14_4 112 265 IPR001251 -
Mtr3g3461 272 SUPERFAMILY CRAL/TRIO N-terminal domain 35 100 IPR036273 -
Mtr3g3461 272 CDD SEC14 119 263 IPR001251 -
Mtr3g3461 272 PANTHER OS03G0850700 PROTEIN 29 272 - -
Mtr3g3461 272 SUPERFAMILY CRAL/TRIO domain 108 265 IPR036865 -
Mtr3g3461 272 Gene3D - 5 271 IPR036865 -
Mtr3g3461 272 PANTHER POLYPHOSPHOINOSITIDE-BINDING PROTEIN 29 272 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr3g3461 Mtr-Chr3 48432712 48434978 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr3g3461 72 258 Acyl Lipid Metabolism Gene Families AT1G55840 26.601 2.50e-12 63.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr3g3461 - - gmx:100797666 418.313
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr8g3376 8 44244090 44250446 Mtr3g3461 3 48432712 48434978 ECH
Mtr3g3461 3 48432712 48434978 Mtr3g3461 3 48432712 48434978 ECH
Mtr8g3376 8 44244090 44250446 Mtr3g3461 3 48432712 48434978 PCT