Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr8g3347 ATGAATTCTCCAATTCGTGCCCCTTCAACTTCTTCTTGCTCATATATTCGTCCTCATTCTTGCCGCACTTGTGCTTCTCGTAATTTCAAGCTTCCTCTGCTATTGCCACAGGCAATCTGTACCGCTCAAAAGTTGCATCGATGCTCCGGAGGCCACACGGAGGCTTCTAGTAACGTTAATCCGTTGAAAACTTGCATAGTTGGCAAATTTTCTCCAGGATGGTCTGAAGCACAACCCTTGGTTTCCAAGCAATCACTCAACAGGCACCTTTTACCTGTGGAAGCTTTAGTAACTTCAACAACTCAAGATGTTTCCGATACACCTCTTATTGGTGATGACAAGATCGGAGTGTTATTGTTAAACCTTGGAGGTCCAGAGACTCTAGATGATGTGCAGCCTTTTTTATTTAACCTTTTTGCCGATCCAGATATCATACGATTACCAAGGTTATTTAGTTTTCTTCAAAAGCCACTGGCTCAATTTGTATCTGTTTTAAGAGCACCAAAGAGCAAAGAAGGCTATGCTTCCATTGGTGGTGGATCCCCTCTTAGACGTATGACCGATGCACAGGCTGAAGAGTTAAGAAAATCTCTATTTGAAAAGAATGTCCCAGCAAACGTGTATGTTGGCATGCGTTACTGGCATCCATTCACCGAAGAGGCTATTGAGTTGATTAAAAGGGATGGAATTACAAAGCTTGTTGTGCTTCCACTTTATCCACAATTTTCAATTTCGACCAGTGGTTCAAGTTTGCGTCTCTTGGAGAGCATATTCCGAGAAGATGAGTATCTAGTCAACATGCAGCACACAGTCATACCTTCGTGGTACCAACGTGAAGGATACATAAAGGCAATGGCAAATTTAATTGAAAAAGAGCTAAAAGGTTTTGACTTACCAGAGAAGGTCATGATATTCTTCAGCGCACATGGGGTTCCAGTTGCGTATGTGGAAGAGGCTGGTGATCCATACAAAGCAGAGATGGAGGAATGTGTGGATTTAATCATGGAAGAGCTTGAGAAAAGAAAGATAACCAATGCATACACACTTGCTTATCAGAGTAGAGTTGGACCTGTGGAATGGTTAAAACCCTATACAGATGAGACAATAATTGAACTTGGGAAAAAGGGAGTAAAAAGTTTGCTCGCCGTACCAATTAGCTTTGTCAGTGAACATATTGAAACACTAGAAGAAATTGATGTTGAGTACAAAGAATTGGCTTTAGAATCTGGAATAGAAAATTGGGGCCGTGTTCCTGCTCTTGGATGTGAACCCACTTTCATTTCAGACTTGGCAGATGCTGTAATTGAGAGTCTCCCATATGTTGGTGCGATGGCAGTTTCAAACCTTGAAGCTCGACAGTCTTTGGTTCCCCTGGGCAGTGTAGAAGAGTTATTGGCAGCATATGACTCACAACGTAGGGAGTTGCCACCACCAATATTGGTGTGGGAATGGGGATGGACGAAGAGTGCTGAAACTTGGAATGGAAGAGCAGCTATGATTGCTGTGTTGCTTCTGTTGTTTTTAGAAGTCACCACTGGAGAGGGATTTTTGCACCAGTGGGGAATATTGCCCTTATTTAGGTGA 1584 0.4261 MNSPIRAPSTSSCSYIRPHSCRTCASRNFKLPLLLPQAICTAQKLHRCSGGHTEASSNVNPLKTCIVGKFSPGWSEAQPLVSKQSLNRHLLPVEALVTSTTQDVSDTPLIGDDKIGVLLLNLGGPETLDDVQPFLFNLFADPDIIRLPRLFSFLQKPLAQFVSVLRAPKSKEGYASIGGGSPLRRMTDAQAEELRKSLFEKNVPANVYVGMRYWHPFTEEAIELIKRDGITKLVVLPLYPQFSISTSGSSLRLLESIFREDEYLVNMQHTVIPSWYQREGYIKAMANLIEKELKGFDLPEKVMIFFSAHGVPVAYVEEAGDPYKAEMEECVDLIMEELEKRKITNAYTLAYQSRVGPVEWLKPYTDETIIELGKKGVKSLLAVPISFVSEHIETLEEIDVEYKELALESGIENWGRVPALGCEPTFISDLADAVIESLPYVGAMAVSNLEARQSLVPLGSVEELLAAYDSQRRELPPPILVWEWGWTKSAETWNGRAAMIAVLLLLFLEVTTGEGFLHQWGILPLFR* 528
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr8g3347 527 Pfam Ferrochelatase 114 437 IPR001015 GO:0004325|GO:0006783
Mtr8g3347 527 ProSitePatterns Ferrochelatase signature. 304 325 IPR019772 GO:0004325|GO:0006783
Mtr8g3347 527 Hamap Coproporphyrin III ferrochelatase [cpfC]. 113 438 IPR001015 GO:0004325|GO:0006783
Mtr8g3347 527 PANTHER FERROCHELATASE 72 448 IPR001015 GO:0004325|GO:0006783
Mtr8g3347 527 SUPERFAMILY Chlorophyll a-b binding protein 482 522 - -
Mtr8g3347 527 CDD Ferrochelatase_C 283 421 IPR033644 -
Mtr8g3347 527 TIGRFAM hemH: ferrochelatase 113 438 IPR001015 GO:0004325|GO:0006783
Mtr8g3347 527 PANTHER FERROCHELATASE-1, CHLOROPLASTIC/MITOCHONDRIAL 72 448 - -
Mtr8g3347 527 SUPERFAMILY Chelatase 113 444 - -
Mtr8g3347 527 CDD Ferrochelatase_N 115 277 IPR033659 -
Mtr8g3347 527 Gene3D - 276 419 - -
Mtr8g3347 527 Gene3D - 114 437 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr8g3347 Mtr-Chr8 44002969 44009300 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr8g3347 K01772 - gmx:100803481 949.888
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr8g3347 8 44002969 44009300 Mtr8g3347 8 44002969 44009300 ECH
Mtr8g3347 8 44002969 44009300 Mtr3g3417 3 48064278 48069404 PCT