Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr8g3322 ATGGACCGGAGGAGTTGGTTATGGAGGAGAAAGTCATCGGAGAAAAGTCCAGGCGAAACGGAGAGTTCAGGATCACTATCTTCTCTCTCAGAAAGATTTTCTGATGAACAGGTATATCCAATCCAAGCTACTCTATCACCAGAGGTCACATCTAAGCTTGCACCTAATGAAGAAGTTAGTACACCCAAAAAATATAATGAAGAAGGTATTGACGTGAAGACTCTTACAAACGAATTAGCTGCAGCTCTGTTAGAAATTAGTGCCAAAGAAGACATGGTAAAGCAGCATTCTAAAGTTGCCGAAGAAGCTATCTCAGGCTGGGAGAAGGCTGAAAACGAGGTGTCGTCTTTAAAACAACAACTTGATGCTGCAAGGCAGAAGAACTCAGGCCTTGAAGACCGAGTTAGTCACCTTGATGGGGCCCTCAAAGAGTGTATGAGGCAGCTTCGCCAAGCCAGAGAAGTACAAGAGCAAAAGATCCATGAAGCTGTTGCAAATAACTCTCATGACTCAGGATCCAGAAGATTCGAACTTGAGAGAAAAGTTGCCGAGCTTGAGGCTCAACTTCAAACATCAAAAGCAGAAGCTGCTGCATCTATTCGCTCCGATCTTCAGAGGAGACTTGAAGCTGTGGAGAAGGAGAATTCGAGTCTTCAGCTTGAGCTGCAATCTCGACTTGAGGAACTAGAATTCAGGATTGCAGAGAGGGATTTGAGTACTCAAGCTGCTGAAACAGCTAGTAAGCAACATTTGGAGAGCACCAAGAAGGTTGCTAAGCTTGAAGCTGAGTGCCGTAGACTGAAATCCATGACTCGTAAAACATTTAATGTGAATGATAATAGGTCGTTGACCGCATCTTCAGTTTATATTGAGTCCCTCACAGATAGCATTTCAGATGGTGGAGAGCTGAATGAATATGAACCAAGCTGTTCTGACTCATGTTCATCTGCTTTAATTACCGAATTTGATCAATTCAAGAATAAAAAGGTTACTAGAAAAAATCATATTGCGACTTCAACTGAGATCAATCTCATGGATGATTTCCTTGAGATGGAAAGGCTTGCTGCCTTGCCAGATACAGAAAGTGGAAGCCATTATGCTAATGGAGGACGAGTATTGGATCAATCTATTGTTGGTCAAGGTACAATGGAAGCTATGATTGAAAAGAACGCCGAATTGGAAAAGAAGCTGGAGAAAATGGAGGCAGCTAAACTTGATGTAGAGATGAGTTTAACTGAGTGCCAAATGCAGCTTGAAAAATCAGAGAATCGGATAAGAGCAGCAGAATTGAAGGTAGAAGAGCTTCAAACTCAGTTAGCTCTTGCAAACAAATCGAATCAAGAAGCATATGAAGAACTGAAAGAAACCAAAACAAAGAAGGAGATAGTTGAGTCGAAACTCAAATTTGCTCAAACTGAGGTAGAAGAACTGATTTCAAAAATCCATTCATTGGAGGAAGAGATTCAAAAGGAACGTGCTTTGTCTGCTGAGAATTCGATCAAGAGCAGGAAGTTAGAGGGCGAGCTTTCAAGAATGAAGCATGAAGCTCAAGTTCAGCAAGATGCCAAGACTTTGCACAAGGAAAATATTAATCGCGATTTGAAGTCAAAACAGGACAAAGAACTTGCATTGGCTACTAGCAAGTTTGCCGAGTGCCAAAAAACCATCGCATCTCTTGGAAAGCAGTTGAAGTCACTTGCAACATTGGAAGACTTCCTACTTGATTCAGACAACAGCCCTATGGAGTTAACTTGTGAAGTTACACAAAGTCCCCAAAAAGGAGGTGAAAAATTGAAATTAAATCATAGTGATTTGAGTATGCCCAAAAGAGATTCAATAAACTCATCTATTACTCATGAGAAAAGCCGTAATGGATTTGGTAAGTTCATACCAAGAAGCAAGAGTGTGAGCAGGGCTCGTTGA 1923 0.4134 MDRRSWLWRRKSSEKSPGETESSGSLSSLSERFSDEQVYPIQATLSPEVTSKLAPNEEVSTPKKYNEEGIDVKTLTNELAAALLEISAKEDMVKQHSKVAEEAISGWEKAENEVSSLKQQLDAARQKNSGLEDRVSHLDGALKECMRQLRQAREVQEQKIHEAVANNSHDSGSRRFELERKVAELEAQLQTSKAEAAASIRSDLQRRLEAVEKENSSLQLELQSRLEELEFRIAERDLSTQAAETASKQHLESTKKVAKLEAECRRLKSMTRKTFNVNDNRSLTASSVYIESLTDSISDGGELNEYEPSCSDSCSSALITEFDQFKNKKVTRKNHIATSTEINLMDDFLEMERLAALPDTESGSHYANGGRVLDQSIVGQGTMEAMIEKNAELEKKLEKMEAAKLDVEMSLTECQMQLEKSENRIRAAELKVEELQTQLALANKSNQEAYEELKETKTKKEIVESKLKFAQTEVEELISKIHSLEEEIQKERALSAENSIKSRKLEGELSRMKHEAQVQQDAKTLHKENINRDLKSKQDKELALATSKFAECQKTIASLGKQLKSLATLEDFLLDSDNSPMELTCEVTQSPQKGGEKLKLNHSDLSMPKRDSINSSITHEKSRNGFGKFIPRSKSVSRAR* 641
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr8g3322 640 Coils Coil 175 228 - -
Mtr8g3322 640 Coils Coil 383 494 - -
Mtr8g3322 640 MobiDBLite consensus disorder prediction 587 640 - -
Mtr8g3322 640 Coils Coil 72 92 - -
Mtr8g3322 640 Coils Coil 243 263 - -
Mtr8g3322 640 Pfam Filament-like plant protein, long coiled-coil 373 568 IPR008587 -
Mtr8g3322 640 Pfam Filament-like plant protein, long coiled-coil 89 198 IPR008587 -
Mtr8g3322 640 Pfam Filament-like plant protein, long coiled-coil 189 273 IPR008587 -
Mtr8g3322 640 Pfam Filament-like plant protein, long coiled-coil 291 360 IPR008587 -
Mtr8g3322 640 MobiDBLite consensus disorder prediction 607 622 - -
Mtr8g3322 640 Coils Coil 107 134 - -
Mtr8g3322 640 MobiDBLite consensus disorder prediction 1 68 - -
Mtr8g3322 640 MobiDBLite consensus disorder prediction 18 57 - -
Mtr8g3322 640 PANTHER FILAMENT-LIKE PLANT PROTEIN 4 1 631 - -
Mtr8g3322 640 MobiDBLite consensus disorder prediction 1 17 - -
Mtr8g3322 640 Coils Coil 138 166 - -
Mtr8g3322 640 PANTHER FILAMENT-LIKE PLANT PROTEIN 1 631 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr8g3322 Mtr-Chr8 43703922 43708419 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr8g3322 - - gmx:100796048 827.78
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr8g3322 8 43703922 43708419 Mtr8g3322 8 43703922 43708419 ECH
Mtr8g3322 8 43703922 43708419 Mtr3g3400 3 47870283 47874381 ECH